Gene Spro_3245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3245 
Symbol 
ID5606518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3577758 
End bp3579344 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content54% 
IMG OID640938788 
Producthypothetical protein 
Protein accessionYP_001479471 
Protein GI157371482 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0153368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTTGA AAAGGGCTTT TGCACGCCAC GTTTCACACA GACGACGCAG TTTGGTTAAA 
AGCAGTGTCG TGGCCCTGGT ATTTTTTATC CTGTTTATGG GGATTACGCT TTCGCTGATT
AACCACCAGC GCACGCAATA TCAACGTGCG GTAGAACAAC GTACGCAGAA ATTCACCCTC
GATACCTTTA ATAACCTGAC TCAAATCATG CAGCGGTTGA TGCCGCTAAC CGAACAACCC
TGTAGCAGCA GCCAACCGGA AATTACCTAT CAGGCGGCTT TTCATGCCGG CGTGCGTACC
TTTATGTTGG TGAAAAACGG CTTTGCCTAT TGCTCTTCCG CCACCGGCGA CATGATGTTG
GCGCTGAAAA ATATTTATCC GGAGATTGAT CAACGCCAGC GGTTGGATCT CAAATTGCAG
CAAGGTACGC CACTGGTGCC GGGAAAACCG GCGTTCGCGG TTTGGCTGCG TCAGGCAGGC
AAGGAAGATA CCGGCATACT GGCGACGCTG GATATCGGCC TGATGCCCCA ACAGATGTTT
GGCACCAGCC CCGAACGTGC GCCAGGCATT GCCATTATTC TGGGCGATCG CGCCCTGACC
AGCTTTAGCC CGAACCTGAT GCCGGTCAAC CAGTTGCCGG ACGAAAAGGC CGACCGCATT
TCCATCGCCG GCACCCCGAT GATTATTATG TTTTATAACC AAAAATTGAC GCCCAACGAT
ATCCGCCTGA CTCTGCTGGG TAGTCTGGTG CTGTCCTTAA TGATCGGCGT GCTGTGCTAC
TACATGCTGT TACTGCGCCA AAGCCCGGAG CGCGCCCTGA TGCGCGGCAT CAAACGCAAC
GAATTCTTTA TCGAGTATCA ACCGGTATTT CATACCAAAA CCGGCACCAT CGCTGGGTTG
GAAGCGCTGA TCCGCTGGCA GCACCCGATC GAAGGACGTA TTCCGCCGGA TCTGTTTATT
CCCTACGCCG AAAGCGAAGG GCTGATAGTG CCGCTGACGC GTCACCTGTT CCGCCTGATT
GCCGAAGACG CCCCCAGGCT GGCGACGGCG CTGCCGCAGG GCGCCAAGCT CGGTCTGAAC
ATCTCCCCTT CTCATCTCAG TGCGCCCTCT TTCCATCAGG ACGTGTACGA ACTGCTGGCG
CAATTGCCGG GCAATTACTT TACGTTGGTA TTTGAAATTA CCGAGCGCGG CATGGTGGAG
GAAGGCAACG CGCTGGCGGA GTTCGACTGG TTGCATAAAC AAGGCATTGA AATTGCCATC
GATGACTTCG GTACCGGCCA CAGCGCACTG ATCTATCTGC AACGCTTTAG CATGGACTAT
CTGAAAATCG ACCGCGGTTT CGTCAACTCC ATCGGCCGGG ATACGGTCAC CGCACCGGTA
CTGGACGCGG TCATTTCACT GGCCAAAAAA CTCAAAATGC AAACCGTGGC GGAGGGCGTA
GAAACCGCAG AACAGGTGAG CTTCCTGCAG GAACAGGACG TTAATTTTAT GCAGGGGTAC
TATTACAGCA AACCGTTGAG CATCGACAAT TTTGTCGCCT TCTGCAACGC CCATACGGTC
ATGGACCATC AGGCGCTAAC GGACTGA
 
Protein sequence
MGLKRAFARH VSHRRRSLVK SSVVALVFFI LFMGITLSLI NHQRTQYQRA VEQRTQKFTL 
DTFNNLTQIM QRLMPLTEQP CSSSQPEITY QAAFHAGVRT FMLVKNGFAY CSSATGDMML
ALKNIYPEID QRQRLDLKLQ QGTPLVPGKP AFAVWLRQAG KEDTGILATL DIGLMPQQMF
GTSPERAPGI AIILGDRALT SFSPNLMPVN QLPDEKADRI SIAGTPMIIM FYNQKLTPND
IRLTLLGSLV LSLMIGVLCY YMLLLRQSPE RALMRGIKRN EFFIEYQPVF HTKTGTIAGL
EALIRWQHPI EGRIPPDLFI PYAESEGLIV PLTRHLFRLI AEDAPRLATA LPQGAKLGLN
ISPSHLSAPS FHQDVYELLA QLPGNYFTLV FEITERGMVE EGNALAEFDW LHKQGIEIAI
DDFGTGHSAL IYLQRFSMDY LKIDRGFVNS IGRDTVTAPV LDAVISLAKK LKMQTVAEGV
ETAEQVSFLQ EQDVNFMQGY YYSKPLSIDN FVAFCNAHTV MDHQALTD