Gene Spro_3122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3122 
Symbol 
ID5604679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3437242 
End bp3437922 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content63% 
IMG OID640938664 
ProductTenA family transcription regulator 
Protein accessionYP_001479350 
Protein GI157371361 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACTC CCCAATTCGA CGACGGTCTC TACGGCCAAC TGCGCCTGCG CGCCGGTAGC 
CACTGGCAGG ACTATGTCGC TCACCCCTTT ATTCAGCAAC TGGCCGCCGG TACGCTACCC
GAACCTGCTT TCCGCCGCTA TCTGACCCAG GACTATCTGT TCCTGATCCA CTTCGCCCGC
GCCTACGCCC TGCTGGTCAG CAAACTGCGC ACCCTGCCGG AGATGCGCAC GGCCACCGCC
TCGCTCAATG CGATTGTCGC CGAGCTGCCT TTGCATCTGG CCTATTGCGC TGACTGGGGC
CTCAGCGAGC CGCAGATTGC CGCCGAGCCA GAAGCCGCAG AAACCCTCAA TTACACCCGT
TATGTGCTCG ATATCGGCCA CTCCGGGGAC GCTCTCGACC TGCTGGCGGC GCTGTTGCCC
TGCGTCGCCG GCTATGCCGA GATTGGCCTG CGGCTGCTGG GCGACCCTGC CACGGTGATG
GAGGGCAACC CTTACGCCTC GTGGATCCGC AACTATGGCG ATCCGGGCTA CCTGGCCGGG
GTGCAGGCCG CTATCGATCT GCTGGAAAAC GTCGCCCGTC AGCGCGGTGC AGAAAGCCGC
CTGGGCGAAC TGTCAGAGAT TTTCACCACC GCCACCCGGC TGGAATCTGC CTTCTGGCAA
ATGGGGCTGA ATGCCCAATG A
 
Protein sequence
MFTPQFDDGL YGQLRLRAGS HWQDYVAHPF IQQLAAGTLP EPAFRRYLTQ DYLFLIHFAR 
AYALLVSKLR TLPEMRTATA SLNAIVAELP LHLAYCADWG LSEPQIAAEP EAAETLNYTR
YVLDIGHSGD ALDLLAALLP CVAGYAEIGL RLLGDPATVM EGNPYASWIR NYGDPGYLAG
VQAAIDLLEN VARQRGAESR LGELSEIFTT ATRLESAFWQ MGLNAQ