| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3117 |
|---|
| Symbol | |
|---|
| ID | 5604618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 3431818 |
|---|
| End bp | 3432879 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640938659 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_001479345 |
|---|
| Protein GI | 157371356 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCCA TTCGCTCCGG CTCGGTGGTG TTTGAGAACG TCACCAAACA GTTTGCCGAC
TTCACTGCCC TGCCCGGCCT TTCGCTCACC GTCGAACCCG GCACGCTGGT GACGCTGCTC
GGCCCTTCGG GCTGCGGCAA AACCACCACC CTGCGCCTGC TGGCCGGCCT GGAACACCCG
ACCTCAGGAC GTATTCTGAT CGGCGGCAAA GATGTCACGC ATCTGCCTGC CAATGAGCGC
GACGTGGCTA TGGTGTTCCA GTCCTACGCC CTGTTCCCGC ATATGAATGC GCTGGACAAC
GTGATGTACG GCCTGCTCGC CAGCGGTCTG CCGCGTAAAG AAGCGCAGGA TCGGGCGCGT
GAAGGGTTGA AGCTGGTCGG ACTGGAAAAC ATGGGCCAAC GCCTGCCCGC CGAACTCTCT
GGCGGCCAGC AGCAGCGCAT TGCCGTGTCG CGTGCGCTGG TTTTAGAACC CCAGGTGCTG
CTGCTCGACG AACCCCTATC CAATCTTGAC GAACGGCTGC GTCGCCGGGT GCGCACCGAG
ATCCGCGACT TGCAGCAGCG CCTTGGCTTT ACCGCCGTGT ATGTCACTCA CGATCAGGAA
GAGGCTTTGG CGGTCTCCGA TAAGATTATC GTCATGAAAG AAGGGCATAT TGCCCAACAG
GGTGCGCCAC AGGAGCTCTA TCACTCGCCG GCGTCGGTGT TTATCGCCGA CTTTATGGGC
GAGGCCAATA TTCTGCCTTG TGACATTGAG CGGGTAGATA ACGGCGAGGC GCTGATCACC
CTCGGCAGCC GTCAGTACCG GGTGCCGGGC GCTAAAGCCC GCCCTGGTGC CGCCCAGCTT
TCGGTGCGGC CGCAGTTTAT TACCCTGCAG CCAGAGCAGA CCGGGGCATT AAACGGTGAA
GTGACCCACA GCGCCTGGCT GGGGGACCAT ATCGAATATG AAGTGAAGAC CGATCTCGGC
GCGCTGTTTA TTGTCGATGT GCAGATGGAA CGCCAGCTGA CGCCGACCAC TCGCGTCGCC
ATTGATTTCA AATCGCAGGG GCTGGCGCTG ATTGCCCAGT AA
|
|---|
| Protein sequence | MTAIRSGSVV FENVTKQFAD FTALPGLSLT VEPGTLVTLL GPSGCGKTTT LRLLAGLEHP
TSGRILIGGK DVTHLPANER DVAMVFQSYA LFPHMNALDN VMYGLLASGL PRKEAQDRAR
EGLKLVGLEN MGQRLPAELS GGQQQRIAVS RALVLEPQVL LLDEPLSNLD ERLRRRVRTE
IRDLQQRLGF TAVYVTHDQE EALAVSDKII VMKEGHIAQQ GAPQELYHSP ASVFIADFMG
EANILPCDIE RVDNGEALIT LGSRQYRVPG AKARPGAAQL SVRPQFITLQ PEQTGALNGE
VTHSAWLGDH IEYEVKTDLG ALFIVDVQME RQLTPTTRVA IDFKSQGLAL IAQ
|
|---|
| |