Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3005 |
Symbol | |
ID | 5603889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 3305545 |
End bp | 3306027 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640938546 |
Product | hypothetical protein |
Protein accession | YP_001479234 |
Protein GI | 157371245 |
COG category | [S] Function unknown |
COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTATTG ATATGTTCCT GAAAGTTGAA GGTGCCAGCG GTGAATCTAA AGATTCAAAT CACAAAGGCT GGACCGACAT TACTTCTTTC TCCTGGGGCG CTTCTCAACC AGGCAACATG AGCGTGGGTG GTGGCGGTGG TGCCGGTAAG GTTTGCTTTA ACGATCTGCA TGTCAATGCG CTGGTCGACA AATCAACCCC GGCGCTGCTG AAACACTGCT CCAGCGGTAA ACACCTGACC AAGATTGAAC TGTCAGTCTG TAAAGCCGGT GGCAGCCAGG TTGAATACGT CAAAATCACT CTGGACGACG TGCTGGTCAC TGCCGTGCAG TACACCGGTG CCGGCGGTGA AGACACCGTG GGCGTAACCT ACTCCTTCCA GGCATCAAAA GTGAAACAGC AGTACTGGGA GCAGAGTGAT AAAGGTGGTA AAGGCGCAGA AAGCAGCGCA GGTTGGAATA TCAAGGAAAA CCGCGAAGCT TAA
|
Protein sequence | MAIDMFLKVE GASGESKDSN HKGWTDITSF SWGASQPGNM SVGGGGGAGK VCFNDLHVNA LVDKSTPALL KHCSSGKHLT KIELSVCKAG GSQVEYVKIT LDDVLVTAVQ YTGAGGEDTV GVTYSFQASK VKQQYWEQSD KGGKGAESSA GWNIKENREA
|
| |