Gene Spro_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3005 
Symbol 
ID5603889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3305545 
End bp3306027 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content52% 
IMG OID640938546 
Producthypothetical protein 
Protein accessionYP_001479234 
Protein GI157371245 
COG category[S] Function unknown 
COG ID[COG3157] Hemolysin-coregulated protein (uncharacterized) 
TIGRFAM ID[TIGR03344] type VI secretion system effector, Hcp1 family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATTG ATATGTTCCT GAAAGTTGAA GGTGCCAGCG GTGAATCTAA AGATTCAAAT 
CACAAAGGCT GGACCGACAT TACTTCTTTC TCCTGGGGCG CTTCTCAACC AGGCAACATG
AGCGTGGGTG GTGGCGGTGG TGCCGGTAAG GTTTGCTTTA ACGATCTGCA TGTCAATGCG
CTGGTCGACA AATCAACCCC GGCGCTGCTG AAACACTGCT CCAGCGGTAA ACACCTGACC
AAGATTGAAC TGTCAGTCTG TAAAGCCGGT GGCAGCCAGG TTGAATACGT CAAAATCACT
CTGGACGACG TGCTGGTCAC TGCCGTGCAG TACACCGGTG CCGGCGGTGA AGACACCGTG
GGCGTAACCT ACTCCTTCCA GGCATCAAAA GTGAAACAGC AGTACTGGGA GCAGAGTGAT
AAAGGTGGTA AAGGCGCAGA AAGCAGCGCA GGTTGGAATA TCAAGGAAAA CCGCGAAGCT
TAA
 
Protein sequence
MAIDMFLKVE GASGESKDSN HKGWTDITSF SWGASQPGNM SVGGGGGAGK VCFNDLHVNA 
LVDKSTPALL KHCSSGKHLT KIELSVCKAG GSQVEYVKIT LDDVLVTAVQ YTGAGGEDTV
GVTYSFQASK VKQQYWEQSD KGGKGAESSA GWNIKENREA