Gene Spro_3002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3002 
Symbol 
ID5603880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3302089 
End bp3303114 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content62% 
IMG OID640938543 
ProductImpA domain-containing protein 
Protein accessionYP_001479231 
Protein GI157371242 
COG category[S] Function unknown 
COG ID[COG3515] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03363] type VI secretion-associated protein, ImpA family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCG ACACCCTGTT AGCCCCGGTT GACGCAGAAA ATCCCTGCGG CGAAAACCTG 
GAATATGACA CCGATTTTCT GGCGATGGAG CAGGCTGCGA CCGGTAAGAG CGAGCAGCAG
TTCGGCAGCA CTATCATTCC GGCAGAAGCA CCGGACTGGG TGCAGGTGGA ACGGCTCGCG
ACCACGCTGC TGATGCGTAC CAAAGATTTA CGGGTGATGC TGTGCCTGAC CCGCGCCTGG
ACGCAACTGC GCGGATTGCA AGGTTACGCC GACGGTCTGA TGCTGATCCA CCAGGCGCTG
GAGCGCTACT GGGACACGCT GCTGCCGTTG CTGGAGTTCG ACGGCGAGGC TGACCCGCTG
TTTCGCATCA ACGTGCTGGC CGATCTCGGC GACAAGGCCG CGCTGACCAC CAGCGTGCGC
GCCGCGCCGC TGCTGAAAGG GGCTACCGGT GAAATCTCGC TGCGCGACGC CGGGGCCCTG
CTCGACGGCA GTAAGCTCGA GTGCCCGACC TTTCCTGGTG GCCGTGCGCG CCTGCAGGAT
GAACTGTCTC AGCCGGAGCG CCCGGAGGCG CAATTGGTGA TACGCATCGC CGAAACCCTC
GCTGCCATCC GTACTACGGT CACTCGCCAT TTAGGCGAAA GCGCCCTGCC GGAAATGCAC
AACCTGACAA AAATTTTCGC CCTGGTCGCT CAGTTCGGCC AGGACAGCGC CCCGGCCAGC
GAGTCAGCCG AACAGCCAAA TGACGCCGCC GTACCACCGA CCAGCGCTGC CGCAGCGGCC
CCGGCCGCCA CGCTCAACTG GCGCAGTGCG CAAATACAGT CACGCGACGA CGCCCAACTG
ATGCTGGACA AGGTAAAACA CTATTTCCGT CTTCATGAGC CCAGCCACCC GGCGCCGCTG
ATGATCGACC GGGTACAGCG GCTGATTGCA CTGGACTTTA TGCAAATAAT CCGCGATTTG
GCACCCGATG GTCTTAACCA ACTGGAGACC ATTCTAGGTC GCCCCGATAA CGAGGAGAAC
AACTAG
 
Protein sequence
MAIDTLLAPV DAENPCGENL EYDTDFLAME QAATGKSEQQ FGSTIIPAEA PDWVQVERLA 
TTLLMRTKDL RVMLCLTRAW TQLRGLQGYA DGLMLIHQAL ERYWDTLLPL LEFDGEADPL
FRINVLADLG DKAALTTSVR AAPLLKGATG EISLRDAGAL LDGSKLECPT FPGGRARLQD
ELSQPERPEA QLVIRIAETL AAIRTTVTRH LGESALPEMH NLTKIFALVA QFGQDSAPAS
ESAEQPNDAA VPPTSAAAAA PAATLNWRSA QIQSRDDAQL MLDKVKHYFR LHEPSHPAPL
MIDRVQRLIA LDFMQIIRDL APDGLNQLET ILGRPDNEEN N