Gene Spro_3001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3001 
Symbol 
ID5603879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3301343 
End bp3302065 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content59% 
IMG OID640938542 
Producthypothetical protein 
Protein accessionYP_001479230 
Protein GI157371241 
COG category[S] Function unknown 
COG ID[COG3913] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03373] type VI secretion-associated protein, BMA_A0400 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGCA ATGACCTGAT CCCAACCACA AGCATTGGCT GGTATGGCAA GATCCCTTCC 
GCCGGTGACT TCCTGCAGCG TCGTCTGCCG GATATGGTGG TTAACAATTG GGCCCACTGG
TTCCATAACG GCCTGGTGAA TCTGCAGCGC AATCCACCGG GCGCGAACGG AAATCCTTTC
AGCAATGCGC CAGTATGGAA CTTCGTCATT CCGGCCACGC TCGGCAGTCA GTATGTCCAG
ATGGGCTGCC TGTTGCCCGC TCGTGACCGG GTGGGACGTC ATTACCCGAT CTGCGCCCTA
CGCCTGTTCT GCCAGCAAGA CTGGCGAACT CAGCAGTTGA ACATGGCGGC GGAATGGTAC
AACCAGCTCG GCCACCGGCT GCTCAATGGC GTGCGCAACG GTTTTTCCGC CGAGCAGCTC
GACCGTTCGC TGCTGGAAAT CCCCGCGCTG CCGACCCCAC CGGCGGAGGC CGATTCCGAG
ATCCTGTCGA TTATCGGCTT CCAGCATCCT GACGTACCCG GCCTGGGCTG GCAACAGGCG
GCCGACTGTT TCGACCCGGC GCAATACACC AGTTTCTGGT GGACCAATCA GGCCGATGGG
CATCCGCTCT ATACCCATGT GCACAGCGGT AACCTTACCG TGCAACTGTT CTCTCTGCTG
TTTGAACCCA ATGGCTGGGC GCGCCCCGGT CGTGGCGGTC AATATCCGCA GATGTTTGAT
TAA
 
Protein sequence
MMSNDLIPTT SIGWYGKIPS AGDFLQRRLP DMVVNNWAHW FHNGLVNLQR NPPGANGNPF 
SNAPVWNFVI PATLGSQYVQ MGCLLPARDR VGRHYPICAL RLFCQQDWRT QQLNMAAEWY
NQLGHRLLNG VRNGFSAEQL DRSLLEIPAL PTPPAEADSE ILSIIGFQHP DVPGLGWQQA
ADCFDPAQYT SFWWTNQADG HPLYTHVHSG NLTVQLFSLL FEPNGWARPG RGGQYPQMFD