Gene Spro_2997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2997 
Symbol 
ID5603857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3294549 
End bp3295079 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content57% 
IMG OID640938538 
Productputative lipoprotein 
Protein accessionYP_001479226 
Protein GI157371237 
COG category[S] Function unknown 
COG ID[COG3521] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03352] type VI secretion lipoprotein, VC_A0113 family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACAA CACCCACCAC CTCCCGCTGG TGCGGGATAG TGTTCCTGCT GTTGGGCGCA 
TTGGTGCTCA ACGGCTGCAT GTCTTCTGCC AAGAGCGTGC CCTCGCGTTA TAGCCTGGTC
TTCGATGCCG ACAGCCAGGT GAACGCCGCG GCAGGCCAAC GACCGGCACC GATAAAGATT
CGGGTACTGC TGCTACGTTC CGATGCGGAA TTTATGGACG CTGACTTCTT CAGCCTGCAG
AGCGATGCCA AAAGCGTGCT CGGCGCCAGC CTGCTGGACA GCGACCAATT CTTCCTGACC
CCGGGCCAAA GGGGCAAGAA ACTCGGCGGC CAAAGCACGC TCGAAACTCG TTATATCGGC
ATCATCGCCG AATATCAGAA CCTCGATGGC AAAGCCTGGC GCATTTCACT GCCGCTACCG
GAACCGACCG AGACCAATTT CTACAAGGTG TGGCAATTCT CACCGGATGA GCTGGAAGCC
CACATTGTGG CAGGCATTAA TGGCCTGCAC TCCGTGAAAG ATCCCGACTG A
 
Protein sequence
MITTPTTSRW CGIVFLLLGA LVLNGCMSSA KSVPSRYSLV FDADSQVNAA AGQRPAPIKI 
RVLLLRSDAE FMDADFFSLQ SDAKSVLGAS LLDSDQFFLT PGQRGKKLGG QSTLETRYIG
IIAEYQNLDG KAWRISLPLP EPTETNFYKV WQFSPDELEA HIVAGINGLH SVKDPD