Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2926 |
Symbol | |
ID | 5603353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 3222226 |
End bp | 3224373 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640938467 |
Product | TonB-dependent receptor |
Protein accession | YP_001479155 |
Protein GI | 157371166 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000198793 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGCA CTCATAAAAA CCGGTTGGCA GTTTCAGCGC TGGTTATTCC AGCCCTACTG CCTGTTTCTG CCAGCTTTGC GCAGGACAAG GATAGCGAAC AGACCATGGT GGTCACGGCC AAACGCAGCG GTCTTTCTGA ACTCTCAACC CCGGCTGCCG TCAGCGTGGT CACGGGCGAT CAAATCCGTG AGGCGAGGCC GCAGATCAAT CTGTCGGAAA GCCTGGGCAG CGTGCCGGGT CTGCAAATTC AGAACCGCCA GAACTATGCG CAGGATTTGC AGCTCTCGGT GCGTGGTTTC GGCGCGCGCT CAATGTATGG CGTGCGCGGC GTGCGTATCT ATGTCGATGG CATTCCGGCC ACCATGCCGG ATGGGCAGGG GCAGACCTCG AATATTGACC TTAACTCGGT CGAGAAGGTG GAAGTGTTAC GCGGCCCGTT TTCCGCGCTC TACGGTAACG CCTCCGGCGG CATGGTGAAT GTGGAAACCG AAACCGGCCA ACAGCCACCC CGCATTGAGG CCGGTTCGTA CTTCGGCAGC TACGGCACCT GGCGTTATGG CGTCAAGGCC ACCGGGGCGA CCGGTGACGG TACCCACGCC GGTGATGTCA ACTACACCAT TTCCGGTACC CGTTTTACCA CTCAGGGGTT CCGTGACCAC AGTGGCGCAC GGAAAAATCT TGGTAATGCC AAGCTCGGTG TTCGCATCGA CGATGTCAGT ACGCTCACGC TGCTGTTCAA CAGTGTAGAT ATCAACGCCA ACGATCCGGG CGGCCTGACG AATGCCGAAT GGCACGATAA TCCGCGCCAG GCACCGCGAG CCGATCAGTA CAATACGCGC AAAACCACTT CACAAACTCA GGCCGGGTTG CACTACCAGC GTGAGATGGG AGTTGATGAC GATCTCAGCA TCATGATGTA TGCCGGTGAG CGTGAAACCA CTCAGTACCA GTCGATCCCG GTCGCGGTAC AGCAGCGCAG TGCGCAGCAT CCGGGCGGGG TGATTGATCT GACGCGCCAT TATCAGGGGA TTGATACCCG CTGGACGCAC CGTGGCGAGC TGGGCGTGCC ATATACCCTG ACCGGCGGGC TGGATTATGA AACCATGACC GAGCAGCGTA AAGGGTATGA AAACTTTACT CAGGTCAACG GCGTCACCGA GCTTGGCACC GAGGGAGCGC TGCGCCGTAA CGAACGCAAC CTGATGTGGA ATGTGGATCC TTACCTGCAA ACCTCATGGC AGTTGACGCA ACAACTGACG CTGGATGTTG GTATGCGTTA CAGCACCGTC AATTTCGACT CTAACGATCA CTACGTTACC GGTGCCAATG GCGATGACAG CGGCAGCGCC AGTTATCATC AGTGGCTGCC TGCCGGATCC CTCAACTATG CGGTGATGAG CGGTTGGAAC CTGTATCTTT CTGCCGGCCG CGGTTTTGAG ACGCCGACAA TTAACGAACT GTCTTACCGT TCAGGCGATC AGGCCGGGTT GAACTTCGGC CTGAATCCCT CGACCAGCGA CACGGTGGAG TTGGGCAGTA AAACCCGCAT TGGCAATGGC CTGCTGACCG CCGCCGTTTT CCAGACTGAC ACCCGCAACG AAATCGTGGT GGATGAAAGC AGCAACGGGC GCACCAGCTA CAAAAACGCC GGGCAGACCC GCAGGCGTGG TCTGGAGCTG GCGCTGGATC AGCAATTCGC TTATGACTGG CGGGTACAGC TGGCCTGGAC GCTGCTGGAT GCACGCTATC GCGATGATGT GTGCGGCGAC AGCCAGTGTT CGGCGACCAA CATGGTGCCC AGTGGCAACC GCATGCCGGG CATTGCGCGC AATATGGGCT ATGCCTCGCT TGCCTGGTCA CCGCCGGAAG GTTGGTATGC CGGCGCAGAG GTGCGCTATA TGAGTGATAT TGAAGTTAAC GATGCCAACA CGGAGCAGGC CCCGGCTTAT ACCACCGTTG GTTTGAATAC CGGTTACCGC TATCCGCTGG GTAATTGGAT GCTTAACGTT TTCGGCCGGG TAGATAATCT GTTTGACCGA CAATATGTAG GGTCGGTGAT CGTTAATGAA GGTAATGGCC GTTACTACGA ACCGGCACCG GGCAGAAACT GGGGCGGCGG ATTGAGCGTC TCTTATACCT TCGAGTAA
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Protein sequence | MKSTHKNRLA VSALVIPALL PVSASFAQDK DSEQTMVVTA KRSGLSELST PAAVSVVTGD QIREARPQIN LSESLGSVPG LQIQNRQNYA QDLQLSVRGF GARSMYGVRG VRIYVDGIPA TMPDGQGQTS NIDLNSVEKV EVLRGPFSAL YGNASGGMVN VETETGQQPP RIEAGSYFGS YGTWRYGVKA TGATGDGTHA GDVNYTISGT RFTTQGFRDH SGARKNLGNA KLGVRIDDVS TLTLLFNSVD INANDPGGLT NAEWHDNPRQ APRADQYNTR KTTSQTQAGL HYQREMGVDD DLSIMMYAGE RETTQYQSIP VAVQQRSAQH PGGVIDLTRH YQGIDTRWTH RGELGVPYTL TGGLDYETMT EQRKGYENFT QVNGVTELGT EGALRRNERN LMWNVDPYLQ TSWQLTQQLT LDVGMRYSTV NFDSNDHYVT GANGDDSGSA SYHQWLPAGS LNYAVMSGWN LYLSAGRGFE TPTINELSYR SGDQAGLNFG LNPSTSDTVE LGSKTRIGNG LLTAAVFQTD TRNEIVVDES SNGRTSYKNA GQTRRRGLEL ALDQQFAYDW RVQLAWTLLD ARYRDDVCGD SQCSATNMVP SGNRMPGIAR NMGYASLAWS PPEGWYAGAE VRYMSDIEVN DANTEQAPAY TTVGLNTGYR YPLGNWMLNV FGRVDNLFDR QYVGSVIVNE GNGRYYEPAP GRNWGGGLSV SYTFE
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