| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2906 |
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| Symbol | |
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| ID | 5603321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 3195017 |
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| End bp | 3199162 |
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| Gene Length | 4146 bp |
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| Protein Length | 1381 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640938447 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_001479135 |
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| Protein GI | 157371146 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase
[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit
[TIGR02378] nitrite reductase [NAD(P)H], small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAAC CCAGACTGGT GGTGATTGGT AACGGCATGG CCGGTATGCG GCTGGTGGAA
ACCCTGTGTC GGCTGGCGCC AGAGCGTTAT GCCATCACGG TGATTGGCGA AGAGCCGCGT
GGCAACTACA ACCGCATTCT GCTTTCGCCG GTGTTGGCGG GGGATAAGGC CTTCAGCGAC
ACCCTGCTGC ATGACTATGA CTGGTATCGG CAGCAGGGAG TGCAACTGCT GGCCGGAGAC
CCGGTGCTGG CAGTGGATCG GCAGCAAAAG TGGGTGAGTA CTGCCCGGCA TCGGTTGCCT
TATGACCAGC TGGTGTTGGC TACCGGTTCG CGCCCCTTGC TGCCACCGCT GCCGGGTGGG
GCATTGAACG GCATTTATGG CTTCCGCACT CTGGATGATG TTGAAGCGAT GATCGCTTGC
TGTCGTCCAG GCCGACCGGC GCTGGTGATG GGCGGCGGCG TCTTGGGGAT TGAGGCGGCG
GCGGCACTGG CGCAGCGCGG CATGAGCGTC ACCGTGGTGC ACCGGGGCGA GCACCTGATG
GAACGTCAGT TGGATGCCCG TGCGGGGCGG ATGCTGCAAC ATAACCTGTT GCAGCGCGGG
ATCGAATGCC GGCTGAACTG CGAAGTCAGC CGGTTTCAGG GAAGCGAGCG GGTCAGTTCG
GCCAGCCTGA GTAACGGCGA GATAGTGGCC TGCGAACTGG TGGTGATCGC CGTCGGGGTG
CAGCCGGAAA TTAGCCTGGC GCACTCCGCC GGACTGGCCT GCCGGCGCGG CATCGTGATC
GACGACCAGA TGCAAACGGC AGATCCGGCG GTGTTCGCCA TCGGCGAATG TGCTCAGTTT
GGCGAGACCA CTTTGGGCCT GGTGGCCTCC TGCTGGCAGC AGGCTGAACT GTTGGCGCGG
CGGCTGAGTG GGGAGCCGGT GGCGGGCTAC CGGCCAACGC CGTTGCATAC CCGCCTGAAG
GTCAGCGGCG TCGAGGTGTT CAGTGCCGGT GAGATGGCCA CAGGCGGGCT CACCGAGGTC
CATCACGCCG AAGACCCGCA GGCACAGCAT TACCGCCGCC TGCTGGTGCG CGACGGAAAA
TTACAGGGCG TGGTGTTGTA TGGCGACGCT CAGGACAGCC CTTTTTATCT GCAGCAGCTT
GGCCTGCCGG TGCAACACCC GGACGACTTG CTGTTTGGCA GCAGCGAACC CGTGACGCCT
GCGGCGTCTG ACGAGAGGAT ATCTGATATG CACAAGCCCG TTTTGGTGGT TGCCGGTCAC
GGCATGGTCG GTCATCACTT CCTGGAACAA CTGGTTACGC GCGAGCTGCA TTTGCAGTAC
CACATTGTGG TGTTTGGCGA AGAGCCGGTG GCGGCTTACG ACCGGGTACA CCTGTCCGAG
TTTTTCTCCG GCCGCAGTGC GGACTCGCTG TCGATGGTCG AAGCGGGTTT CTTCGAGCGT
AGTGGCATAG AACTGCGGTT GGGGCAGGAG GTGTGCGCTA TCGACAGACA ACGCAAATAC
GTGATTGATG CCGAGGGCCG TGAGACGGCC TATGACCAGT TGGTGCTGGC GACCGGCTCC
TATCCGTTTG TACCGCCGAT CCCCGGCAAC GATCGCCCTG GCTGCCTGGT TTACCGCACG
CTCGACGATC TGGCCGCGAT CGCAGACTGC GCCAAAACCG CGCGCGTCGG GGTGGTGGTC
GGTGGCGGCT TGCTGGGACT GGAGGCTGCC AATGCGTTGC GTCAGCTTGG GCTGAACACC
CATGTCGTGG AGTTTGCGCC GCGCCTGATG GGGGTACAGT TGGATGACGG TGGCGCGACC
ATGTTGCGCA GTAAAATTGA GGCATTGGGC GTCAGTGTGC ATACCGGCAA GCAAACTCAG
GCGATTATTG AAGGTTCGTT ACACCGTCAC TGCATGAGTT TTGCCGATGG GGAGCAGTTA
GAGGCTGATT TAATTCTGTT TTCCGCCGGT ATCCGTCCTC GTGATCAGCT TGCCCGCGCT
GCCGAACTGG AGGTGGGAGC ACGCGGCGGT ATTGTGATTG ATAGCCAGTG CCGCACCAGC
GACGAGGCGA TTTATGCCAT CGGTGAATGC GCCTTGTGGA ACGGACAAAT TTTCGGCCTG
GTGGCACCGG GCTACCAAAT GGCGCGTATC CTGGCCGATC GACTGGCTGG AGGCGAAAAC
GTGTTCTGTG GCGCGGACAT GAGCACCAAA CTGAAACTGT TGGGCGTGGA AGTGGCGTCG
ATCGGTGATG CCCATGCTCA CACCCCCGGC AGCCAGAGCT ACACCTGGGT CGACGGCCCG
CAGCAGGTGT ATAAAAAAGT GGTGATTGAC GCGGATGGCA AGCGATTGCT GGGGGCGGTG
CTGGTGGGCG ACAGTGCTGA ATACAGCACG CTGCAACAGA TGATGCTTAA CTGTCTGCCG
TTACCCACCA CCCCGGAAAG CCTGATTTTA CCCGCAACGG CGGGGGCTGC GCCGAAAGCG
CTGGGCGTTT CCGCCTTGCC GGCCACGGCG CAGATCTGTT CTTGCCATAA CGTCAGCAAG
GGCGATATCA GTGACGCGGT GGAGCTGGGG TGCGGCGATT TGGCGGCGGT AAAAGCCTGC
ACCAAAGCGG GCACCGGCTG TGGCGGCTGT TCGGCGCTGG TAAAACAGCT GATGGATCAC
GAATTGCAGC AGCGTGGCGT GGTGGTGAAG AAAGACATTT GCGAGCATTT CGCCCATTCA
CGGCAGGAGC TGTATCACCT GGTCCGCGTT GGCAACATCC GTACCTTTGA CGAGTTGCTG
GCCCGACATG GTCATGGGTA TGGCTGTGAG GTGTGCAAAC CGCTGGCGGG GTCGATTCTG
GCTTCGTGCT GGAACGAATA TCTGCTAAAG CCGCAGCATC TGCCGTTGCA GGATACCAAC
GATCGCTTTT TTGCCAATAT CCAGAAAGAT GGCACCTATT CGGTGGTACC GCGGGTACCG
GCCGGGGAAA TTACTCCGCA AGGATTGATC GCCATCGGCC AAATCGCTCT GCGCTATCAG
CTCTACACCA AGATTACCGG CGGCCAGCGG GTTGACCTGT TCGGCGCCCG GCTGGAGCAA
TTGCCGGAGA TTTGGCAGCA GCTGGTCGAC GCCGGATTTG AAACCGGGCA TGCCTACGGC
AAGTCACTGC GCACGGTGAA ATCTTGTGTC GGCTCCAGTT GGTGCCGCTA TGGCGTGCAG
GATTCCACCG CGCTGGCTAT CGAGCTGGAG CATCGTTACA AGGGGTTACG GTCGCCGCAT
AAAATCAAGA TGGCGGTTTC CGGCTGCACG CGAGAGTGTG CGGAGGCGCA GAGCAAAGAC
GTCGGGGTCA TTGCCACCGA GAAAGGCTGG AACCTGTACC TGTGCGGCAA CGGCGGCATG
AAACCGCGCC ATGCCGATTT ATTTGCCAGC GATCTTGATA CCGCCACGCT GATCCGCACG
GTCGACCGTT TCCTGATGTT CTACATTCGT ACCGCCGATC GTCTACAGCG CACCAGCACC
TGGATGGACA ACCTGGAAGG TGGGCTGGAC TACCTGCGTG AAGTGGTTTT GCAGGACAGC
CTGGGGATCG GTAGCGAATT GGATGCCGAA ATGGAAACTG TGGTCAGCCA TTACCAATGT
GAATGGCAAA CCACGCTCGC CAGCCCGGAT CGCCTCAAGC TGTTCCGTCC GTTTGTGAAC
AGCGAACAGC CGGATGAGGC CATAGTCTGG CAGGCGGAGC GTGGACAACG TCGCCCGGCG
GCAGGGGTGG AACGCGGGCA GGTGATTGAG GTGCAACCGG CGGTGGCCGC CCGGGAACAG
TGGCTGGATG TCTGTGCGCT GGCGGAAATC CCGGTCAACG CCGGCATTGC CGCCCGGCTG
GGGCAGCGGC AGATTGCTCT ATTCCATCTG GCGGACAAGG GCGTTTATGC GTTGGCCAAT
CAGGAACCGG ACAGTGACGC CAACGTGCTG GCACGCGGGC TGTTGGGGGA CGTAGCCGGT
GAGCCGGTGG TGATTTCTCC GCTATACAAA CAGCGTTTTC GTTTGAGTGA CGGTATCTGT
GCAGATAATG CCGGGCGTGC CGTCACCGCC TGGCCGGTGC GGGTAGAAGC AGGCCGTGTG
TGGGTATGCA GTACGCCGCT GTCGATACAG GCCAAACTGC CAGAAACGGC GGAAGTGACG
TCATGA
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| Protein sequence | MDKPRLVVIG NGMAGMRLVE TLCRLAPERY AITVIGEEPR GNYNRILLSP VLAGDKAFSD
TLLHDYDWYR QQGVQLLAGD PVLAVDRQQK WVSTARHRLP YDQLVLATGS RPLLPPLPGG
ALNGIYGFRT LDDVEAMIAC CRPGRPALVM GGGVLGIEAA AALAQRGMSV TVVHRGEHLM
ERQLDARAGR MLQHNLLQRG IECRLNCEVS RFQGSERVSS ASLSNGEIVA CELVVIAVGV
QPEISLAHSA GLACRRGIVI DDQMQTADPA VFAIGECAQF GETTLGLVAS CWQQAELLAR
RLSGEPVAGY RPTPLHTRLK VSGVEVFSAG EMATGGLTEV HHAEDPQAQH YRRLLVRDGK
LQGVVLYGDA QDSPFYLQQL GLPVQHPDDL LFGSSEPVTP AASDERISDM HKPVLVVAGH
GMVGHHFLEQ LVTRELHLQY HIVVFGEEPV AAYDRVHLSE FFSGRSADSL SMVEAGFFER
SGIELRLGQE VCAIDRQRKY VIDAEGRETA YDQLVLATGS YPFVPPIPGN DRPGCLVYRT
LDDLAAIADC AKTARVGVVV GGGLLGLEAA NALRQLGLNT HVVEFAPRLM GVQLDDGGAT
MLRSKIEALG VSVHTGKQTQ AIIEGSLHRH CMSFADGEQL EADLILFSAG IRPRDQLARA
AELEVGARGG IVIDSQCRTS DEAIYAIGEC ALWNGQIFGL VAPGYQMARI LADRLAGGEN
VFCGADMSTK LKLLGVEVAS IGDAHAHTPG SQSYTWVDGP QQVYKKVVID ADGKRLLGAV
LVGDSAEYST LQQMMLNCLP LPTTPESLIL PATAGAAPKA LGVSALPATA QICSCHNVSK
GDISDAVELG CGDLAAVKAC TKAGTGCGGC SALVKQLMDH ELQQRGVVVK KDICEHFAHS
RQELYHLVRV GNIRTFDELL ARHGHGYGCE VCKPLAGSIL ASCWNEYLLK PQHLPLQDTN
DRFFANIQKD GTYSVVPRVP AGEITPQGLI AIGQIALRYQ LYTKITGGQR VDLFGARLEQ
LPEIWQQLVD AGFETGHAYG KSLRTVKSCV GSSWCRYGVQ DSTALAIELE HRYKGLRSPH
KIKMAVSGCT RECAEAQSKD VGVIATEKGW NLYLCGNGGM KPRHADLFAS DLDTATLIRT
VDRFLMFYIR TADRLQRTST WMDNLEGGLD YLREVVLQDS LGIGSELDAE METVVSHYQC
EWQTTLASPD RLKLFRPFVN SEQPDEAIVW QAERGQRRPA AGVERGQVIE VQPAVAAREQ
WLDVCALAEI PVNAGIAARL GQRQIALFHL ADKGVYALAN QEPDSDANVL ARGLLGDVAG
EPVVISPLYK QRFRLSDGIC ADNAGRAVTA WPVRVEAGRV WVCSTPLSIQ AKLPETAEVT
S
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