Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2894 |
Symbol | |
ID | 5603298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 3178710 |
End bp | 3179843 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640938435 |
Product | polysaccharide export protein |
Protein accession | YP_001479123 |
Protein GI | 157371134 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0993342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCTTC ATTTGCCTCA TTGGATGCCA CTGGTGCTGT CCAGCGTTTT GCTCAGCGGT TGCACTGCCT TTCCGGGGGC GCACCTGCCG ACCCATGGCA AAGACGTCGT GACTCAGCAG GACGAAGACT TCGATTTGAA CAAGCAGGTC CAGGTGTATC GCGTTACGCC GCTGCTACTG CAGAAAATGC GCCGGGTAGA GCCGGTGGCG CGGCCAAATC TGGCGCTGGA CCAGCGTCTG CAAGGTTATC AGTACCGTAT TGGTATCGGC GATGTGCTTA ACGTTACCGT CTGGGATCAC CCCGAATTGA CCACCCCGGC GGGGCAGTAC CGCAGCGCCA GCGACACCGG CAACTGGGTG CATGCCGACG GTTCAATCTT CTACCCCTAC ATCGGCCGGG TGAAGGTGGT GGGTAAAACC GTCAGCGAAG TGCGCAACCA GATCGCCGGC CGGTTGGCGA CCTATGTGGA AAGTCCACAG GTCGACGTCA GCATTGCCGC CTTCCGCTCG CAAAAAGTCT ATGTGACCGG CGAAGTGAAA ACCTCCGGGC AGCAGGCGGT GACCAACGTG CCGTTGACCA TTCTTGATGC GATCAATGCC GCCGGTGGTC TGACAGATAA CGCCGACTGG CGCAACGTGG TGCTGACGCA TCAGGGCAAA GAGCAGCCGA TTTCCCTGCA GGCGCTGATG CAGCGCGGCG ATATCAGCCA GAACCACCTG CTGGAGCCGG GAGACATCCT GTATGTGCCG CGCAACGACG AACTGAAAGT CTTTGTGATG GGTGAGGTCG GCAAGCAGTC GACGCTGAAA ATGGACCGCA GCGGTATGAC GCTGACCGAG GCACTGGGCA GCTCCGAAGG GATCAGCCAA ACGGTGGCCG ACGCCACCGG CGTATTCGTG ATCCGCCCGA ATGGCGGCAA ACAGCCACAG CGGCTGGCGT CGCTGTACCA GTTTGACCTG TCTGATGCCT CCGCGCTGGC GATGGGCACC GAATTCCAGT TGGAACCTTA CGACGTGGTG TACGTCACTG CGGCGCCGAT CGCGCGCTGG AACCGTTTGA TCAGCCAGTT GGCACCGACC ATTTCCAGCT TTAACGACCT TAGCGAGGCC ACGTTGCGGG TCCGTAATTG GTAA
|
Protein sequence | MNLHLPHWMP LVLSSVLLSG CTAFPGAHLP THGKDVVTQQ DEDFDLNKQV QVYRVTPLLL QKMRRVEPVA RPNLALDQRL QGYQYRIGIG DVLNVTVWDH PELTTPAGQY RSASDTGNWV HADGSIFYPY IGRVKVVGKT VSEVRNQIAG RLATYVESPQ VDVSIAAFRS QKVYVTGEVK TSGQQAVTNV PLTILDAINA AGGLTDNADW RNVVLTHQGK EQPISLQALM QRGDISQNHL LEPGDILYVP RNDELKVFVM GEVGKQSTLK MDRSGMTLTE ALGSSEGISQ TVADATGVFV IRPNGGKQPQ RLASLYQFDL SDASALAMGT EFQLEPYDVV YVTAAPIARW NRLISQLAPT ISSFNDLSEA TLRVRNW
|
| |