Gene Spro_2759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2759 
Symbol 
ID5607225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3038070 
End bp3039242 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content55% 
IMG OID640938300 
Productribonuclease D 
Protein accessionYP_001478988 
Protein GI157370999 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID[TIGR01388] ribonuclease D 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.08089e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00170183 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGGCGT TGTTGTGTTT GAATCATGAA AGCGACCAAG AGAATGACGT TTTGAACTAT 
CAGTTGATCA CTACCGATGC CGGATTGCAG CAGGTCTGCG ATCAGGCGAA AAAGCATGCC
CAGATTGCGC TGGACACCGA ATTTGTCAGA ACGCGCACTT ACTATCCGCA GTTAGGCCTG
ATTCAGTTAT ACGATGGTGA ACAACTCTCC CTGATTGACC CCTTGCCAAT CAAGCAGTGG
CAGCCGTTTA TCGAGCTGCT GAGCAACACT CAGGTGGTGA AATTCCTGCA CGCCGGCAGT
GAGGATCTGG AAGTGTTCCT CAACGCGTTC AAAACGCTAC CGACGCCAAT GGTGGATACC
CAGATCCTGG CGGCCTTTAC CGGTCGTCCG ATGTCTTGTG GCTTCGCTAC CCTGGTGGCG
GAGTACATGG AGGTAGAGCT GGATAAAAGC GAAGCCCGGA CTGACTGGCT GGCGCGTCCG
CTGACGGAAA AACAGTGTGT CTACGCTGCG GCGGACGTGT TCTATCTGTT GCCAATGGCC
AAACGGCTGG TGCAGGAGAC GGAAGAGGCC GGTTGGACGG CGGCTGCCAG CAATGAATGC
CTGCTGTTGT GTCAACGCCG TAGCGAGACG CTGGCGCCGG AATTGGCCTA TCGCGAAATT
ACCAACGCCT GGCAATTACG TCCCCGCCAG TTGGGTTGCT TGCAGAAACT GGCTGAATGG
CGACTGCGTC AGGCGCGTGA GCGTGATCTG GCGGTGAACT TCGTGGTACG TGAGGAGAAC
CTCTGGCAGG TAGCGCGTCA TATGCCGACC TCGCTGGGTG AACTGGACTC GCTGGGGCTG
AGCGGCCCTG AAATTCGTTA TCATGGTAAA ACGCTGGTGG CGTTGGTGGC AGAGGCCGCC
GAGCTGGAAG AATCGGCATT GCCGGAGCCG TTACCGAACC TGATCGACCA GCCGGGTTAT
AAGAAAGTAT TTAAGGAAAT CAAAGCGGCG ATCGTCATTG CCAGTGAGCA AAGCGGGTTG
AGCAGCGAAT TGTTGGCATC GCGTCGGCAG ATTAACCAGT TGCTGAACTG GCATTGGAAA
TTGAAGGTTG GCGACAATTT GCCAGAATTA GTCAGCGGAT GGCGCGGTGA TTTATTAGCG
GCACCACTTC AGGACATTTT GAAGGGTTAT TAA
 
Protein sequence
MPALLCLNHE SDQENDVLNY QLITTDAGLQ QVCDQAKKHA QIALDTEFVR TRTYYPQLGL 
IQLYDGEQLS LIDPLPIKQW QPFIELLSNT QVVKFLHAGS EDLEVFLNAF KTLPTPMVDT
QILAAFTGRP MSCGFATLVA EYMEVELDKS EARTDWLARP LTEKQCVYAA ADVFYLLPMA
KRLVQETEEA GWTAAASNEC LLLCQRRSET LAPELAYREI TNAWQLRPRQ LGCLQKLAEW
RLRQARERDL AVNFVVREEN LWQVARHMPT SLGELDSLGL SGPEIRYHGK TLVALVAEAA
ELEESALPEP LPNLIDQPGY KKVFKEIKAA IVIASEQSGL SSELLASRRQ INQLLNWHWK
LKVGDNLPEL VSGWRGDLLA APLQDILKGY