Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2722 |
Symbol | |
ID | 5606768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 2998395 |
End bp | 3000251 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640938263 |
Product | protease 4 |
Protein accession | YP_001478951 |
Protein GI | 157370962 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.35096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.004785 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCACAT TGTGGCAAAT CATTGCCGGC GTTTTCAGGT GGACATGGCG TCTGCTGAAC TTTATCAGGG AACTGATCCT CAATTTGTTC CTGGTGTTGC TGATCCTGGT TGGGGTCGGT ATCTATCTTT CATTCCAGAG TGCCACCACC CCTGCCGTGC CTACCCGCGG TGCGTTGCTG GTGGACCTGA GCGGCGTGGT GGTTGACCAA CCGTCGATGA ACAACAAGGT TCGCCAATGG GGTCGTGAAC TGTTGGGCGC TTCCAGCAAC CGCCTGCAGG AAAACTCCCT GTTTGACGTG GTTGACAGCA TCCGCAAGGC TAAAGACGAC AAAAACATTA CCGGCATGGT ATTGCAGTTG AATGACTTTG CCGGTGCCGA TCAGCCTTCG CTGCAGTACA TCGGCAAGGC GCTACGTGAA TTCCGTGACA GTGGCAAACC GATCTTTGCC ATTGGCGACA GCTATAACCA GACGCAATAT TATCTGGCCA GCTACGCCAA CAAGGTTTAT CTGTCGCCAC AGGGTGCGGT CGACCTGCAC GGCTTTGCCA CCAACAACCT TTACTACAAA TCGTTGTTGG AAAAACTCAA GGTCACCACC AACATCTTCC GCGTCGGTAC CTATAAATCC GCCGTGGAAC CCTTGATCCG TGACGATATG TCACCGGCCG CCCGTGAGGC AGACAGCCGC TGGATTGGTG GATTGTGGCA AAACTATCTG GATACCGTGG CGGCTAACCG TCAGATCACG GCGCAACAGC TGTTCCCAGG GGCCGCAGGC GTGCTGAGCG GTATGCAGGC TGCCGGAGGG GATACGGCCA AGTATGCGCT GGATAACAAA CTGGTCGATG AACTGGCGTC GCGCACCGTC ATCGAAAACC AACTGATCAA GACTTTCGGT TGGGACAAGC AGGCCAATGA TTTCAACGCG ACCAGCATCT ACGACTACCA GCCGAAGCCG ACGCCGGATC AAGGCGGTAA AATTGCCGTG ATCTTCGCTA ACGGCGCGAT CATGGACGGT CCGCAAACAC CAGGCACCGT TGGCGGCGAT ACTACCGCCG CAGAACTGCG TCAGGCGCGA CTGGATCCGG CCATCAAGGC GGTGATTTTC CGGGTCAACA GCCCAGGGGG CAGCGTCAGC GCCTCGGAAG TGATCCGCTC CGAGTTGGCT GCGGTACGTG CCGCCGGCAA ACCTGTGGTG GTTTCCATGG GCGGCATGGC GGCCTCGGGC GGCTATTGGG TCTCTACACC GGCGGACTAC ATCATCGCCA GCCCGAGCAC CCTCACCGGT TCCATTGGCA TCTTCGGGGT GATTAACACC TACGAGCAGA CGCTGGACAG CATCGGCGTG CATACCGACG GCGTGGCAAC CTCGCCGCTG GCGGATCTGG CGGTCACCAA GGCGCTGCCG CCGGAGTTCT CGCAGATGAT GCAGTTGAAC ATCGAGAAAG GTTATCAAAA CTTTATCGAC CTGGTCGCCA AGTCACGCAA AATGACACCG CAGCAGGTTG ATCAGATTGC TCAGGGCCAC GTGTGGTTGG GCAGCGATGC CAAGACCAAT GGTCTGGTCG ATCAGTTGGG TGACTTCGAC GACGCGGTGA AGAAAGCCGC CGAACTGGCG CAATTGAAAC AGTGGCAGCT TAACTGGTTT GTCGATACGC CAAGCCTGAC CGATATGGTT CTCAGTCAGT TTGGCGTTTC CATTCACGCC ATGCTGCCGG CAGCCATCCA GTCGATGCTG CCTGCACCCT TGGCATCAGT GGCTATGGCG GTCAAAGAGC AACCGGGTTT GTTCAATAAC CTGAACGATC CGCAAAACCG TTATGCCATC TGTTTGACCT GCGGAGAAGT CCGCTAA
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Protein sequence | MRTLWQIIAG VFRWTWRLLN FIRELILNLF LVLLILVGVG IYLSFQSATT PAVPTRGALL VDLSGVVVDQ PSMNNKVRQW GRELLGASSN RLQENSLFDV VDSIRKAKDD KNITGMVLQL NDFAGADQPS LQYIGKALRE FRDSGKPIFA IGDSYNQTQY YLASYANKVY LSPQGAVDLH GFATNNLYYK SLLEKLKVTT NIFRVGTYKS AVEPLIRDDM SPAAREADSR WIGGLWQNYL DTVAANRQIT AQQLFPGAAG VLSGMQAAGG DTAKYALDNK LVDELASRTV IENQLIKTFG WDKQANDFNA TSIYDYQPKP TPDQGGKIAV IFANGAIMDG PQTPGTVGGD TTAAELRQAR LDPAIKAVIF RVNSPGGSVS ASEVIRSELA AVRAAGKPVV VSMGGMAASG GYWVSTPADY IIASPSTLTG SIGIFGVINT YEQTLDSIGV HTDGVATSPL ADLAVTKALP PEFSQMMQLN IEKGYQNFID LVAKSRKMTP QQVDQIAQGH VWLGSDAKTN GLVDQLGDFD DAVKKAAELA QLKQWQLNWF VDTPSLTDMV LSQFGVSIHA MLPAAIQSML PAPLASVAMA VKEQPGLFNN LNDPQNRYAI CLTCGEVR
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