| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2698 |
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| Symbol | oppD |
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| ID | 5606512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 2970374 |
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| End bp | 2971390 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640938237 |
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| Product | oligopeptide transporter ATP-binding component |
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| Protein accession | YP_001478927 |
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| Protein GI | 157370938 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00275674 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00210263 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACCA TTGAAAATCC GCAGTTGCAA ACCGGTACCG GTGTTAAATC ACCGTTGTTA
CTGGATGTTA AAGATCTGCG CGTGACCTTC GGCACTCCGG ACGGTGATGT GACGGCCGTC
AACGATCTTA ACTTTGACCT GCGTGCCGGT GAAACGCTGG GGATCGTGGG TGAATCCGGC
TCCGGTAAAT CCCAGACCGC TTTCGCGCTG ATGGGGCTGT TGGCCAGCAA TGGCCGCATT
GGCGGCTCGG CCAAATTTAA CGGCCGCGAA ATCCTCAACC TGCCGGAAAA ACAGCTCAAC
AAGCTGCGGG CAGAAGAGAT TTCGATGATC TTCCAGGACC CAATGACTTC GCTCAACCCT
TATATGCGGG TTGGCGAGCA GTTGATGGAA GTGCTGATGC AGCACAAGAA AATGAGTAAA
AGCGAAGCCT TTGAAGAGTC GGTTCGCATG CTCGATGCGG TTAAAATGCC GGAAGCGCGT
AAGCGCATGC GTATGTACCC GCATGAGTTT TCCGGCGGTA TGCGCCAGCG TGTAATGATT
GCCATGGCGC TGCTGTGCCG GCCCAAACTG CTGATTGCCG ATGAGCCGAC CACCGCACTG
GACGTGACGG TTCAGGCACA GATTATGACG TTGCTCAATG AGCTGAAGCG CGAGTTCAAT
ACGGCCATCA TCATGATCAC TCACGACCTG GGGGTGGTGG CCGGTATCTG TAACAAAGTG
CTGGTGATGT ACGCCGGGCG GACCATGGAA TACGGCAGCG CGCGTGACGT GTTCTATCAT
CCGAGCCATC CTTACTCCAT CGGTTTGCTG AATGCGGTAC CGCGTCTGGA CGCCGAAGGT
GAGGCGCTGA TGACTATTCC AGGTAACCCG CCGAACCTGC TGCGTCTACC GAAAGGCTGC
CCGTTCCAGC CGCGTTGTGC GTACGCGATG CCGCAATGTT CGAGCGCTCC GCCATTGGAG
CAGTTTGGTG AAGGGCGCTT GCGTGCCTGC TTTAAACCGG TGGAGGCGTT GGTATGA
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| Protein sequence | MSTIENPQLQ TGTGVKSPLL LDVKDLRVTF GTPDGDVTAV NDLNFDLRAG ETLGIVGESG
SGKSQTAFAL MGLLASNGRI GGSAKFNGRE ILNLPEKQLN KLRAEEISMI FQDPMTSLNP
YMRVGEQLME VLMQHKKMSK SEAFEESVRM LDAVKMPEAR KRMRMYPHEF SGGMRQRVMI
AMALLCRPKL LIADEPTTAL DVTVQAQIMT LLNELKREFN TAIIMITHDL GVVAGICNKV
LVMYAGRTME YGSARDVFYH PSHPYSIGLL NAVPRLDAEG EALMTIPGNP PNLLRLPKGC
PFQPRCAYAM PQCSSAPPLE QFGEGRLRAC FKPVEALV
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