Gene Spro_2587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2587 
Symbol 
ID5604615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2845183 
End bp2846574 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content56% 
IMG OID640938126 
Productarginine/ornithine antiporter 
Protein accessionYP_001478816 
Protein GI157370827 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID[TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAAAAA AACTAGGTCT TACCGCGTTA ACCGCATTGG TGCTGAGCTC AATGCTGGGC 
GCCGGGGTTT TCAGCCTGCC ACAAAACATG GCGCAGGTTG CCAGCCCGGC GGCCCTGCTA
TTGGGTTGGG CAATCACCGG CGTCGGCATC CTGTTTCTGG CTTTTGCCAT GCTGTTGCTA
ACCCGCCTGC GTCCCAATCT GGACGGTGGC ATCTTTACCT ATGCGAAAGA AGGCTTTGGC
GAGCTGGTGG GCTTTTGTTC CGCCTGGGGT TACTGGTTGT GCGCAGTGAT CGCCAATGTC
TCTTACCTGG TTATCGTGTT CGCCGCACTG AGTTTATTCA CCGATCGCGG CGGAAACGTC
ATTCTGGGCG ATGGCAATAC CTGGCAGGCA CTACTGGCAG AGTCAGTATT GCTGTGGATC
GTCCATGCGC TGGTGTTGCG CGGCGTGCAA ACTGCAGCCA GCATCAATCT GGTGGCAACC
CTGGCCAAGC TATTGCCGCT GGGGATGTTC GCCGTGTTGG CGGCGATGGC GTTCAACATG
GACGTCTTTA CGCTGGATTT CCACGGCGTC GCTCTCGGTA AACCGGTGTG GGAACAGGTA
AAAAACACCA TGCTGATTAC CCTGTGGGTA TTTATCGGTG TGGAAGGCGC AGTCGTGGTT
TCAGCGCGGG CGCGTCATAA AAAGGATGTC GGCCGTGCAA CCATGCTGGC AGTGATCTCC
GCGCTGGCGG TTTACCTGCT GGTGACTTTG TTGTCCCTGG GTGTGGTGCC GCGCAGCGAA
TTGGCCGAAA TGCGCAATCC TTCCATGGCG GTGCTGATGG TCGATCTGAT TGGCCCCTGG
GGTGACGTGA TTATCGCGGC CGGGCTGATT GTTTCGGTCT GCGGGGCCTA TCTGAGCTGG
ACGATTATGG CCGCCGAAGT CCCGCTGCTG GCGGCACAAC ACGGCGCTTT CCCAAAGATT
TTCCGCAAGC AGAACAAAAA TCATGCGCCT TCAGCTTCAC TGTGGCTGAC CAATATTGCC
GTGCAGTTCG CACTGGTGCT GATCTGGCTG ACCGGCAGCA ATTATAATTC TTTGCTGACT
ATCGCCTCGG AAATGATCCT GGTGCCTTAT TTCCTGGTCG GTGCCTTCCT GTTTAAGGTG
GCAATTCGTC GTCAGGACAA ACGGCTGATG TTCGCCGCCA CAGGTGCCTG TCTGTACGGT
ATTTGGCTGC TCTACGCTTC TGGGTTAATG CATTTGCTGA TGTCGGTGTT GCTGTATGCA
CCGGGGCTGC TGGTGTTTAT TTATGCCCGA AGCGGACATA ACGACGTCAA GTTGCTGAAT
CAGCTGGAGA AAGGCAGTAT TTTTCTGTTG CTGGTGGCCA CGGTACCGGC CGGCTGGTTT
ATGCTGCAGT AG
 
Protein sequence
MEKKLGLTAL TALVLSSMLG AGVFSLPQNM AQVASPAALL LGWAITGVGI LFLAFAMLLL 
TRLRPNLDGG IFTYAKEGFG ELVGFCSAWG YWLCAVIANV SYLVIVFAAL SLFTDRGGNV
ILGDGNTWQA LLAESVLLWI VHALVLRGVQ TAASINLVAT LAKLLPLGMF AVLAAMAFNM
DVFTLDFHGV ALGKPVWEQV KNTMLITLWV FIGVEGAVVV SARARHKKDV GRATMLAVIS
ALAVYLLVTL LSLGVVPRSE LAEMRNPSMA VLMVDLIGPW GDVIIAAGLI VSVCGAYLSW
TIMAAEVPLL AAQHGAFPKI FRKQNKNHAP SASLWLTNIA VQFALVLIWL TGSNYNSLLT
IASEMILVPY FLVGAFLFKV AIRRQDKRLM FAATGACLYG IWLLYASGLM HLLMSVLLYA
PGLLVFIYAR SGHNDVKLLN QLEKGSIFLL LVATVPAGWF MLQ