| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2501 |
|---|
| Symbol | |
|---|
| ID | 5603659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 2747422 |
|---|
| End bp | 2748150 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640938040 |
|---|
| Product | protocatechuate 3,4-dioxygenase, beta subunit |
|---|
| Protein accession | YP_001478730 |
|---|
| Protein GI | 157370741 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
|---|
| TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA TAGATGAACT CTACCAACGT AACTACGATC GCCATCCGCC GGTGCTGGCA
CCGGAATATA AAACCAGCGT GCTGCGCTCA CCTAAAAATG CGCTGATATC CCTGCAAAAC
TCACTGTCCG AGATCACCGG GCCGGTATTT GGCCAACACG AACTCGGCGC ACTGGATAAC
GACCTGATCC TCAACTACGC CAAACAAGGC TTGCCGATCG GCGAGCGGAT TATCGTGCAC
GGCTACGTTC GTGATGAAAA CGGCTTGCCG ATGCGCAATG CGCTGGTCGA GGTATGGCAA
GCCAATGCCG GTGGGCGTTA CCGCCATAAG AAGGATCAGT ATCTGGCACC GATAGATCCC
AATTTTGGCG GCTGCGGCCG GGTATTAACC GATGAAAACG GCTATTACTT TTTCCGCACC
ATCAAACCCG GCCCTTATCC CTGGCGCAAC CGGGTCAATG ACTGGCGCCC TGCGCATATT
CACTTCTCGC TTTCCGGCAG CGCTTTCGCC CAACGGCTGA TCACTCAAAT GTACTTTGAG
GGCGACCCGT TGATTGCCAG TTGCCCCATC GTGCGCGCCA TCAAAAATGA CGATGCGGTG
CGCTCACTGA TTGCCGGACT GGACAAAACC GCCGCGGTAC AGCTGGACAG CCTGGCCTAT
CGTTTCGATC TGGTGTTACG CGGCCACCGC GCCACCTTGT TTGAAAACCG TCTGCAGGGG
AAAGCATGA
|
|---|
| Protein sequence | MSQIDELYQR NYDRHPPVLA PEYKTSVLRS PKNALISLQN SLSEITGPVF GQHELGALDN
DLILNYAKQG LPIGERIIVH GYVRDENGLP MRNALVEVWQ ANAGGRYRHK KDQYLAPIDP
NFGGCGRVLT DENGYYFFRT IKPGPYPWRN RVNDWRPAHI HFSLSGSAFA QRLITQMYFE
GDPLIASCPI VRAIKNDDAV RSLIAGLDKT AAVQLDSLAY RFDLVLRGHR ATLFENRLQG
KA
|
|---|
| |