Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2493 |
Symbol | |
ID | 5603518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 2736818 |
End bp | 2738635 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640938032 |
Product | SufS subfamily cysteine desulfurase |
Protein accession | YP_001478722 |
Protein GI | 157370733 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTATCC AGACAGTTAC AAGTAGTTCA TTGCCCCACC AGGCGCAGCC TCCAGCCGGT TTGCCGGACG TCAACGCCTT GGCCAATTTG GCCAATCAGA TCTTCAGTGC CTTGCCTGGA CGCGAGATTG GCGCGACGTT GCCGCAGGCT GCCGAGGGTG AACAGGCTGC GACGGTACTG CCACAGTCCT ATGCTCCGGC GCTGGAGCCG ACACTGGCCA CCGAGGTGCC TGAAACGCCA ACGTTGTCTG GCCGCCAGCA GCGCGTGCAG CGACAGGCTT TTCTGGCACC GCCCACGCTG CCTCAACCGC AGGGGCCGGT GGCGAGCGCC GGCTTCTATT TTTTGAAAGA AAACCAGCGT CAGCCGTCGG AGGCGGGGTT AGACCGCCTG GCGAACCAGG CGCTCACCGG TCAAGACTCG CTTAGCGATC AACCCTTTGC GGGGGCGATC AATGGCGGGC TGGAGGCGGT GATTGGCTCG CTGTTTCCGG CTGTCCCACT ACCGGTTCAT GGTGTTGCGC AGGATAATGC CAGCGGAAAC TACTATTTTC TGGAGCAGGG GCGGCCCGGG CGCGAAGCAA CGCCGCAACA GCAACCGCGC AGCAGTTTTG ATGTCCACGC CGTACGTCGC GATTTCCCCA TCCTTGCGGA GCGGGTCAAC GGCAAACCCC TGGTGTGGCT GGATAACGCG GCGACAACTC ATAAGCCGCA GGTGGTGATC GATCGGCTGG CGTATTTTTA TGCGCATGAG AACTCGAATA TCCACCGTGC GGCGCATGAA CTGGCTGCCA GGGCTACCGA TGCCTATGAG GGGGCCAGAA ACAGCGTAGC CCGTTTTCTC GGGGCCAAGT CGGCGGCGGA AATCATCTTT ACCCGTGGCG CGACGGAGGC CATCAATCTG ATTGCCAATA CCTTTGGTCG TCAGCACATT GGCGAAGGCG ATGAGATCGT GGTTTCCCAG TTGGAACACC ACGCCAACAT CGTGCCCTGG CAGCAGCTCG CCGCCAGCGT GGGAGCGAAA ATTCGGGTGA TCCCGGTGGA CGATAGCGGG CAAATTCTGT TGGCAGAATA CCGCAAACTG TTGTCATCGC GTACCCGTCT GGTTTCCATT ACCCAGGTGT CCAACGCGTT GGGCACGGTG ACCCCGGTGG AGGAGGTGAT TGCGTTGGCG CATCAGGTTG GCGCGCGGGT GCTGGTCGAT GGGGCGCAGG CGGTCTCGCA CCTGAAGGTC AATGTGCAGG CGCTGGACGC GGATTTTTAC GTGTTCTCAG GCCACAAGGT GTTTGGCCCA ACGGGTATTG GTGCGGTGTA CGGTAAGGCA GAGCTGCTGG ACACTCTGCC ACCGTGGCAG GGGGGCGGTA ATATGATTGC CGACGTCACC TTTGAAAAAA CGCTGTATCA GCCGGCACCG GCTCGGTTTG AGGCGGGAAC CGGTAACATC GCCGATGCGG TGGGGCTGGG GGCGGCGCTG GACTATGTCG AACGTCTGGG GCTGGACAAT ATCAATCGTT ACGAGCATGA GTTACTGCAG TATGCCACCG ATCGGTTGGT TCGTATTCCC GGCCTGCGTC TGATTGGCAC CGCAGCCAAT AAGGCCAGCG TGCTGTCGTT CGTGCTGAGC GGTTATCGTA CCGAGGAGGT GGGGAATGCG CTAAACCATG AAGGTATTGC GGTGCGCTCC GGTCATCACT GTGCGCAGCC GATCCTGCGG CGCTTTGGCG TTGAGGCCAC GGTGCGGCCT TCACTGGCGT TTTACAATAC TTACGAAGAA GTGGATCTGC TGGCAGCGAC CTTGCACAAG CTGGCCAAAG GGCGCTAA
|
Protein sequence | MTIQTVTSSS LPHQAQPPAG LPDVNALANL ANQIFSALPG REIGATLPQA AEGEQAATVL PQSYAPALEP TLATEVPETP TLSGRQQRVQ RQAFLAPPTL PQPQGPVASA GFYFLKENQR QPSEAGLDRL ANQALTGQDS LSDQPFAGAI NGGLEAVIGS LFPAVPLPVH GVAQDNASGN YYFLEQGRPG REATPQQQPR SSFDVHAVRR DFPILAERVN GKPLVWLDNA ATTHKPQVVI DRLAYFYAHE NSNIHRAAHE LAARATDAYE GARNSVARFL GAKSAAEIIF TRGATEAINL IANTFGRQHI GEGDEIVVSQ LEHHANIVPW QQLAASVGAK IRVIPVDDSG QILLAEYRKL LSSRTRLVSI TQVSNALGTV TPVEEVIALA HQVGARVLVD GAQAVSHLKV NVQALDADFY VFSGHKVFGP TGIGAVYGKA ELLDTLPPWQ GGGNMIADVT FEKTLYQPAP ARFEAGTGNI ADAVGLGAAL DYVERLGLDN INRYEHELLQ YATDRLVRIP GLRLIGTAAN KASVLSFVLS GYRTEEVGNA LNHEGIAVRS GHHCAQPILR RFGVEATVRP SLAFYNTYEE VDLLAATLHK LAKGR
|
| |