| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2462 |
|---|
| Symbol | |
|---|
| ID | 5602950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 2696950 |
|---|
| End bp | 2697735 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640938001 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001478691 |
|---|
| Protein GI | 157370702 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTAG ATGCATTGAA TGCGTTCTCA CTGGATTTCT TTTCGCTGAA GGGCAAGACG
GCCATTGTCA CCGGTGGCAA CAGCGGTCTG GGACAGGCGT TTGCCGTTGC CCTGGCCAAG
GCCGGTGCCA ACCTGTTTAT TCCCAGCTTT GCGATGGATC GCGGCCAAAC CCGCGAAATC
ATTGAACAGC AGGGCGTTCG CGTTGAGTTT ATGCAGGTGG ATATCACCGA AAAAGGGGCA
CCGGCAAGGG TCATCGCACA ATGTATGGCA GACTTTGGCA GCGTGGATAT CCTGGTTAAC
AACGCAGGGA TCTGCAAACT GAACAAGGTG CTGGATTTTG GCCGGGCGGA CTGGGATCCG
ATGATTGACA TCAATCTGAC CGCTGCTTTT GAAATGAGCT ACGAAGCCGC CAAAGTGATG
ATCCCCAATC AGCAGGGCAA GATCATTAAT ATCTGCTCGC TTTTCTCATA TCTTGGCGGG
CAATGGTCCC CGGCCTATTC CGCGACTAAA CATGCATTGG CAGGTTTTAC CAAAGCTTAT
TGCGATGAGC TGGGCCAATA TAATATTCAG GTCAATGGTA TTGCGCCTGG GTATTACGCC
ACCGATATTA CCGCCGAGAC ACGCAGTAAT CCGGAAACCA ATCGCCGCGT TCTGGAGCAT
ATTCCAGCCA ATCGTTGGGG TGACACTCAG GACTTAATGG GCGCAATGGT ATTTCTGGCC
AGTAAGGCAT CAAATTATGT TAATGGCCAC TTGCTGGTGG TCGATGGTGG TTATCTGGTT
CGTTAA
|
|---|
| Protein sequence | MSLDALNAFS LDFFSLKGKT AIVTGGNSGL GQAFAVALAK AGANLFIPSF AMDRGQTREI
IEQQGVRVEF MQVDITEKGA PARVIAQCMA DFGSVDILVN NAGICKLNKV LDFGRADWDP
MIDINLTAAF EMSYEAAKVM IPNQQGKIIN ICSLFSYLGG QWSPAYSATK HALAGFTKAY
CDELGQYNIQ VNGIAPGYYA TDITAETRSN PETNRRVLEH IPANRWGDTQ DLMGAMVFLA
SKASNYVNGH LLVVDGGYLV R
|
|---|
| |