| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2419 |
|---|
| Symbol | |
|---|
| ID | 5603794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 2649423 |
|---|
| End bp | 2650817 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640937958 |
|---|
| Product | diaminobutyrate--2-oxoglutarate aminotransferase |
|---|
| Protein accession | YP_001478648 |
|---|
| Protein GI | 157370659 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
|---|
| TIGRFAM ID | [TIGR00709] 2,4-diaminobutyrate 4-transaminases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000791313 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0278286 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACGG ATAAAGTCCG TATTGATAAT TTCGGTGTGA ATTTAGAAAA TGTAAACAAC
GAAACATATT TGGCGAGACA AGCCGAATTT GAATCGAATG TCAGGAGTTA CCCCCGTAAA
TTGCCGTTGG CAATTGCGAA AGCCCAAGGC GTGTGGATCA CCGATGTTGA GAATAATCAA
TATCTTGATT GCCTGGCTGG TGCGGGTACG CTGGCTCTGG GTCATAACCA TCCTGACATC
CTCCAAAGCA TCCAAAATGT CATTACCAGC GGCTTGCCGT TACATACCCT CGATCTTACA
ACGCCGTTGA AAGATCAGTT CTCAGCTTAT TTGCTCTCTT TATTGCCAGG ACAGGGCCAG
GAATACTGCC TGCAGTTCTG TGGCCCTTCG GGCGCAGACG CGGTTGAAGC CGCTCTGAAA
CTGGCGAAAA AGCACACCGG CCGTTCTGGC GTGATCAGCT TCTCCGGCGG CTATCATGGC
ATGACCCATG GCGCATTGGC GGTTACAGGC AACCTGTCAC CGAAAGAAGC GATTAACGGC
ATGATGCCGG AAGTCCAGTT TATGCCTTAC CCGCATGAGT ACCGCTGCCC GTTGGGTATC
GGCGGCGAAG CCGGCGTTAA GGCACTGACC TACTATTTTG AAAACCTGAT TAATGACGTC
GAAAGCGGCG TGCGCAAACC TGCGGCAGTC ATCCTGGAAG CGGTTCAGGG TGAAGGCGGC
GTCAACCCGG CGCCGGTCGA ATGGTTGCAG CGCATTCGCA AGGTCACTCA GGAACACGGC
ATTCTGCTGA TTATCGACGA AGTTCAAGCC GGCTTTGCCC GTACGGGTAA ACTGTTCGCC
TTCGAACACG CCGGTATTGA GCCGGACATC ATCGTGATGT CCAAAGCGGT GGGCGGCGGC
TTGCCGTTGG CCGTTCTGGG TATCAAGAAA GAATTTGACG CCTGGGAACC TGGCCACCAT
ACCGGCACCT TCCGCGGTAA CCAACTGGCG ATGGCCACCG GCCTGACTAC CCTGCAGCAT
CTTAAAGACC ACAACGTGGC CGGTAAGGTC GCCGCACAAG GCGAATGGCT GAAAGCCAAA
CTGGCCGAGC TGCAAAAACG TTATCCGGCC ATTGGCCACG TGCGCGGCCT GGGCTTGATG
ATCGGCATGG AAATCGTTAA ACCAGGTGAA GCCCAGGATC ATATGGGTTG TTACCCAGCG
GACCCGCAAT TGTCTGCCCT GCTGCAGAAG AAATGTTTCG AAGCCGAGTT GATCCTGGAG
CGTGGCGGCC GTAACGGCAA CGTACTGCGT CTGCTGCCTT CACTGTTGAT CACCAACGAC
GAACTGGGCA TTTTCCTGGA TAAATTTGAA CAGGCCCTGT TAGCCGCCGG CGTCAAGCCT
GTAGGTATGG AGTGA
|
|---|
| Protein sequence | MMTDKVRIDN FGVNLENVNN ETYLARQAEF ESNVRSYPRK LPLAIAKAQG VWITDVENNQ
YLDCLAGAGT LALGHNHPDI LQSIQNVITS GLPLHTLDLT TPLKDQFSAY LLSLLPGQGQ
EYCLQFCGPS GADAVEAALK LAKKHTGRSG VISFSGGYHG MTHGALAVTG NLSPKEAING
MMPEVQFMPY PHEYRCPLGI GGEAGVKALT YYFENLINDV ESGVRKPAAV ILEAVQGEGG
VNPAPVEWLQ RIRKVTQEHG ILLIIDEVQA GFARTGKLFA FEHAGIEPDI IVMSKAVGGG
LPLAVLGIKK EFDAWEPGHH TGTFRGNQLA MATGLTTLQH LKDHNVAGKV AAQGEWLKAK
LAELQKRYPA IGHVRGLGLM IGMEIVKPGE AQDHMGCYPA DPQLSALLQK KCFEAELILE
RGGRNGNVLR LLPSLLITND ELGIFLDKFE QALLAAGVKP VGME
|
|---|
| |