Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2418 |
Symbol | |
ID | 5603793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 2647945 |
End bp | 2649417 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640937957 |
Product | pyridoxal-dependent decarboxylase |
Protein accession | YP_001478647 |
Protein GI | 157370658 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000894226 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0292471 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGGT TAAACCCGAT TCTGGCCGCT TCGGCGCAAA GCACCGAAGC CTACCAGCAA GCGATCGAGC AAAGCAGCCA GGCGGTAGTG CAGTGGCTGC AACAACCCGA GATGTATCAG GGGAAAACCG TTGCCGAATT GCGTGAACGC ATTACGCTTG ATTTTAATCC GCAGGGCCTG GGCAACCAGG CGGCGATCGA ACGCGCGATT GAGTACTTTT TAAAAGACAG CCTGTCGGTA CATCACCCAC AGTGCGTCGC GCATTTGCAT TGCCCAAGCC TGGTGATTAG CCAGGCCGCG GAAGTGCTGA TCAACGCCAC CAACCAGAGC ATGGACTCCT GGGATCAAAG CCCGTCAGCC ACCATCATCG AGATGAAGCT GATTGAGTGG TTGCGTACCC AGGTCGGTTA TCAGCCTGGC GATGCGGGCG TGTTCACCAG CGGCGGTACC CAGAGTAATC TGATGGGCCT GATGCTGGCT CGCGATGCCT TCTTCGCCAA ACAGGGCCAC TCTGTGCAAC AGGATGGCCT GGTCGGTAAC CTGCGCAAGA TTAAAGTCTT ATGTTCTGAG AATGCTCATT TCTCGGTGCA AAAGAACATG GCGTTGCTCG GCCTGGGTTA TCAATCCGTG ACGCTGGTGA AAACCGATCA ATTCGCACGA ATGGATGTGA ACGACCTGGC CGAAAAACTG GCGCAAGCCC AGGCCAATGG CGAACAGATC CTGGCGATCG TCGCCACCGC TGGCACCACC GATGCCGGAG CTATCGACCC GCTGCGTGCG ATTGCGCAGT TGGCGGCAGA ACACCAGATC TGGGTGCATG TTGATGCGGC ATGGGGTGGC GCGTTGCTGC TTTCCGAGAA GTACCGTGAC TATCTGGACG GCATTGAATT AGTGGATTCC ATTACCCTGG ACTTCCATAA ACAGTTCTTC CAGACCATCA GTTGCGGCGC CTTCTTGCTG AAAGAAGCCC GTCACTATGA GCTGATGCGC TATCAGGCGG CCTACCTGAA CTCCGAATTC GACGAAGCTC AGGGCGTGCC TAACCTGGTG TCCAAATCCT TGCAGACCAC CCGCCGTTTT GACGCGTTAA AACTGTGGAT GGGGCTGGAG GCATTAGGGC AACAGCAATA TGCTGCGATC ATCGATCACG GCGTGACGCT GGCACAACAG GTTGCTCACT ATATCGGCGA CCAACCGGCG CTGGAACTGG TGATGCAACC GCAGTTGGCC AGTGTGCTGT TCCGTTACCG TCCGCAGTCA TTAGCCGCCA GCAGCGATGC CGCAGTAGCA CTGCTGAACC AGCGAATTGG TGATGCATTG CTGGAGTCAG GACGTGCCAA CGTCGGGGTG ACCGAATTTA ATGGCGTAAC CTGCCTGAAA ATGACGTTGT TAAACCCAAC GGTCAGCCTG GACGATATCA AAGTCCTGCT GGCACTGGTG GAAAAAACCG CGCAGCAGTT GCCTGCCGCC TAA
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Protein sequence | MSRLNPILAA SAQSTEAYQQ AIEQSSQAVV QWLQQPEMYQ GKTVAELRER ITLDFNPQGL GNQAAIERAI EYFLKDSLSV HHPQCVAHLH CPSLVISQAA EVLINATNQS MDSWDQSPSA TIIEMKLIEW LRTQVGYQPG DAGVFTSGGT QSNLMGLMLA RDAFFAKQGH SVQQDGLVGN LRKIKVLCSE NAHFSVQKNM ALLGLGYQSV TLVKTDQFAR MDVNDLAEKL AQAQANGEQI LAIVATAGTT DAGAIDPLRA IAQLAAEHQI WVHVDAAWGG ALLLSEKYRD YLDGIELVDS ITLDFHKQFF QTISCGAFLL KEARHYELMR YQAAYLNSEF DEAQGVPNLV SKSLQTTRRF DALKLWMGLE ALGQQQYAAI IDHGVTLAQQ VAHYIGDQPA LELVMQPQLA SVLFRYRPQS LAASSDAAVA LLNQRIGDAL LESGRANVGV TEFNGVTCLK MTLLNPTVSL DDIKVLLALV EKTAQQLPAA
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