Gene Spro_2300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2300 
Symbol 
ID5604707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2504082 
End bp2505512 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content60% 
IMG OID640937839 
Productxanthine dehydrogenase small subunit 
Protein accessionYP_001478529 
Protein GI157370540 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG4630] Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A 
TIGRFAM ID[TIGR02963] xanthine dehydrogenase, small subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.289203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAGT TTCTGCTTAA TCAAACGCTG AAAAATGAAA GCGCGATCGA CCCCAATACC 
ACGGTGCTTA ATTATCTGCG CCGCGATCTC GGCCGCTGTG GCACCAAAGA AGGTTGCGCT
TCCGGCGACT GTGGCGCCTG CACCGTGGTG CTGGCGGAGC CGGACGGCGA AGGGTTGCGC
TATCGCAGCG TTAACGCCTG CCTGACGTTT GTCAGTGCGC TGCATGGCAA GCAGTTGATC
ACCGTAGAGG ACCTGAAACA GCAGGGCCAA TTGCACAGCG TGCAGCAGGC GATGGTCGAC
TGCCATGGAT CGCAGTGCGG TTTTTGCACT CCGGGCTTCG TGATGTCGAT GTTCTGTCTG
CAAAAAAACG GTGAAGCCTA TCAGCGTGAA CAGGCGCAGC AGGCACTAGC CGGTAATCTG
TGCCGCTGTA CCGGTTACCG GCCTATTTTG GCGGCGGCGC AGCAGGCGTG CGACAGCAAA
ACGCCAGACA ACTTCGACCG TCATCAACAG CAAACCTTGC AACAACTGCG GACTATCCCG
GCGGCGACGC CGCTGGAGGC AGCGGGGAAA CGCTGTCTGC TGCCGCAAAG CCTTGATGAA
CTGGCGACGC TGTATCTACA GCATCCGCAG GCCAAACTGT TGGCCGGTGG CACCGATCTG
GCTTTGGAAG TCACCCAGCG GCATCAGGAT TTACCCTTGA TGATCGCCAT TGGCCAGATT
GAGGCGTTAA AACAGATTCG TCGGCACGAC GATCGTCTGA TTATTGGTGC CGGGGCGGCG
TTGAGTGACC TTTACCCGCT GTTGGCCGAT TACCACCCGG CCTTTGGCGA ACTGTTGGCG
CGTTTTGCTT CGCAGCAGAT CCGCAACCAG GGCACGCTGG GGGGCAATAT CGGCAACGCT
TCGCCGATTG GCGACGCAGC GCCGCTGCTG CTGGCGCTGG ATGCGCGCCT GATGTTGCGC
TGTGGCACCG TGCGGCGTGA ACTACCGCTG AACGACTTCT TCCTGGGCTA TCGCCAGACC
GCGCTGCAGC CGGGGGAGTT TATTGAAAGC ATCGTGCTGC CGGGCCAGGC ACCGGCGGAT
TTCCGCGCCT GGAAAGTCTC CAAGCGGCTG GAGGATGATA TTTCGGCGGT GTGCGGTGCC
TTCAACCTGA CGATTGAACA GGGGATTATC CGCGATGCCC GGCTGGCCTT TGGTGGCATG
GCCGCGACGC CGAAACTCGC CATATTGTGC GAACGGCAAC TGGTGGGGCA GCCGTGGCGG
CGGGCTACCC TGGAGCTTGC GGTTCAGGCG CTGGCGCAGG ACTTCACCCC GCTGAGCGAT
TTCCGTGCCA GCAGCGCTTA TCGCCTGTTG GTGGCGCAGA ATCTGTTGCG TCGCTATTTC
ATTGCGCTGA CTGAGCCACA GCTGGCGATC GAGGTGACGG CTTATGAGTA A
 
Protein sequence
MIQFLLNQTL KNESAIDPNT TVLNYLRRDL GRCGTKEGCA SGDCGACTVV LAEPDGEGLR 
YRSVNACLTF VSALHGKQLI TVEDLKQQGQ LHSVQQAMVD CHGSQCGFCT PGFVMSMFCL
QKNGEAYQRE QAQQALAGNL CRCTGYRPIL AAAQQACDSK TPDNFDRHQQ QTLQQLRTIP
AATPLEAAGK RCLLPQSLDE LATLYLQHPQ AKLLAGGTDL ALEVTQRHQD LPLMIAIGQI
EALKQIRRHD DRLIIGAGAA LSDLYPLLAD YHPAFGELLA RFASQQIRNQ GTLGGNIGNA
SPIGDAAPLL LALDARLMLR CGTVRRELPL NDFFLGYRQT ALQPGEFIES IVLPGQAPAD
FRAWKVSKRL EDDISAVCGA FNLTIEQGII RDARLAFGGM AATPKLAILC ERQLVGQPWR
RATLELAVQA LAQDFTPLSD FRASSAYRLL VAQNLLRRYF IALTEPQLAI EVTAYE