Gene Spro_2248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2248 
Symbol 
ID5605102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2450337 
End bp2451254 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content58% 
IMG OID640937787 
ProductDNA-binding transcriptional regulator AraC 
Protein accessionYP_001478477 
Protein GI157370488 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.11757e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTATCATC GCATGGCACA GGAACCGCAA CCTAACCCGC TGTTGCCGGG TTACACCTTT 
AACGCTTATC TGGTGGCGGG GCTGACGCCG ATTATGGCGG ACGGTCCGCT GGATTTCTTT
ATCGACCGCC CCGGCGGCAT GAAGGGCTAT ATTCTCAACC TGACCATCAA GGGCCAGGGC
AAGGTGTTTG ACGGTGAAGA TACCCTTTAC TGCAATCCTG GCGATCTGCT GCTGTTTCCG
CCCAAAGCGG CGCATTACTA CGGCCGTTCG CCGGACAGCG ACTGCTGGTA TCACCGCTGG
GTGTATTTCC GTCCGCGCGC CTACTGGGCC GACTGGCTGG AATGGCACAG CAAAACCCAT
GAAGTGGGGC GGCTGACCTT GCCGAACAAT AACCTGTTAC TGGAGTTCGA TCGGCTGTTC
GCCAATATCG AACAGACTCA GCGTTCCGGT CGCCGCTTTG CCGAAGAGCT GGGGATGAAC
CTGCTGGAGC GTCTGCTGTT GCGCGCGATG GAGGAAGACC CGCTCAGCCC ACAGAAAATT
ATGGATCCGC GAGTCATTGA GGCCTGCCAG TTTATCACCG GCAACCTGGC CGGCGAGCTG
CGGATTGACG AGGTGGCGCG CCATGTCTGT TTGTCACCAT CGCGGTTGGC GCATTTGTTC
CGCGAGCAGG TGGGCATCAA TATTCTGCGC TGGCGCGAAG ATCAGCGGGT GATCCGCGCC
AAGCTGCTGT TGCAGACTAC GCAGGAGTCG ATCGCCACCA TAGGTCGGGT GGTGGGTTAT
GACGATCAGC TGTACTTTTC CCGGGTATTT CGCAAGCGGG TGGGCGTTAG CCCGAGCGAT
TTCCGCCGCC GCAGCCTGGA GATAAACTAC CCGGCCAGAA ATCAACGTGA ACAGCCTTAT
GTGGCGGCCT CAAGTTAA
 
Protein sequence
MYHRMAQEPQ PNPLLPGYTF NAYLVAGLTP IMADGPLDFF IDRPGGMKGY ILNLTIKGQG 
KVFDGEDTLY CNPGDLLLFP PKAAHYYGRS PDSDCWYHRW VYFRPRAYWA DWLEWHSKTH
EVGRLTLPNN NLLLEFDRLF ANIEQTQRSG RRFAEELGMN LLERLLLRAM EEDPLSPQKI
MDPRVIEACQ FITGNLAGEL RIDEVARHVC LSPSRLAHLF REQVGINILR WREDQRVIRA
KLLLQTTQES IATIGRVVGY DDQLYFSRVF RKRVGVSPSD FRRRSLEINY PARNQREQPY
VAASS