Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2233 |
Symbol | tppB |
ID | 5605180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 2432574 |
End bp | 2434094 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640937772 |
Product | putative tripeptide transporter permease |
Protein accession | YP_001478462 |
Protein GI | 157370473 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3104] Dipeptide/tripeptide permease |
TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000348133 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGTCAACAG CAAACAACAA CAGCGAACAC CCTGAAAGCG TTAGTCTCAA TGCCTTCAAA CAGCCCAAGG CGTTTTACCT GATCTTCTCT ATTGAGCTCT GGGAACGTTT TGGTTATTAC GGTCTGCAAG GCATCATGGC GGTTTATCTG GTCAAGATGC TGGGCCTGAG CGAAGCCGAC TCGATCACCC TGTTCTCCTC CTTCAGCGCG CTGGTCTATG GCTTCGTTGC CATCGGTGGC TGGCTTGGGG ATAAAGTACT GGGCTCCAAG CGCGTGATCG TGCTGGGTGC GCTGGTGCTG GCCGTCGGCT ATGCCATGGT GGCTTACTCC GGCCATGAGA TCTTCTGGGT ATACCTGGGT ATGGCGACCA TCGCCGTGGG CAGTGGCCTG TTCAAGGCTA ACCCGTCCTC CCTGCTGTCA ACCTGCTACG AGAAAGACGA TCCGCGTTTG GACGGTGCAT TCACCATGTA CTATATGTCC GTCAATATCG GTTCTTTCCT GTCCATGCTG GCCACGCCGT GGTTGGCGGC CAAATATGGC TGGAGCGTCG CGTTCTCTCT GAGCGTCGTC GGCATGCTGA TCACCCTGGT CAACTTTATG GTGTGTCACA AGTGGGTGAA ACAACACGGT TCCAAGCCTG ACTTTAAACC GCTGCAGGTT AAAAAACTGC TGATGGTGCT GGTGGGCGTG GTGGCGCTGG TCGCACTTTC AAGCTGGCTG CTGCATAACC AGATCATTGC TCGCTGGGCG CTGGCGATTG TTTCCATCGG TATCGTGATT GTATTCGCCA AAGAAACCTT CGCGCTGCAC GGCGCGGCAC GTCGCAAGAT GATCGTTGCC TTCCTGTTGA TGCTGGAAGC CGTCGTGTTC TTCGTGCTGT ACAGCCAGAT GCCAACCTCG TTGAACTTCT TCGCCATCCA CAACGTTGAG CACAACATTC TCGGTCTGGC GTTTGAACCC GAACAGTATC AGGCACTGAA CCCGTTCTGG ATCATGCTGG CCAGCCCGAT TCTGGCGGCG CTGTATAACA AGATGGGCGA CCGTCTGCCG ATGCCGCACA AGTTCGCCTT CGGTATGATC CTGTGCTCCG GCGCCTTCCT GGTGTTGCCG TGGGGCGCCA GCTTCGCCAA TGAGCAGGGT ATCGTTTCGG TGAACTGGCT GATCCTGAGC TATGCGCTGC AGAGTATCGG CGAACTGATG ATCTCCGGCC TGGGCCTGGC GATGGTCGCG CAGTTGGTGC CACAACGTCT GATGGGCTTT ATCATGGGTT CCTGGTTCCT GACCACCGCC GCCGCCGCGC TGATTGCCGG TAAAGTGGCA GGTCTGACCG CCGTGCCTGG CGACGTCAAC GATGCGCACG CTTCACTGGC TATCTACAGC CACGTGTTTA TGCAAATCGG TATCGCTACC GCCGTGATCG CCATCCTGAT GATGCTGACC GCGCCGAAGC TGCATCGCAT GACGCTGGAC ACCGCAGAAG ATACCGAGAA GAAAGCTCAG GCGGCCGCTA TCACCAACTG A
|
Protein sequence | MSTANNNSEH PESVSLNAFK QPKAFYLIFS IELWERFGYY GLQGIMAVYL VKMLGLSEAD SITLFSSFSA LVYGFVAIGG WLGDKVLGSK RVIVLGALVL AVGYAMVAYS GHEIFWVYLG MATIAVGSGL FKANPSSLLS TCYEKDDPRL DGAFTMYYMS VNIGSFLSML ATPWLAAKYG WSVAFSLSVV GMLITLVNFM VCHKWVKQHG SKPDFKPLQV KKLLMVLVGV VALVALSSWL LHNQIIARWA LAIVSIGIVI VFAKETFALH GAARRKMIVA FLLMLEAVVF FVLYSQMPTS LNFFAIHNVE HNILGLAFEP EQYQALNPFW IMLASPILAA LYNKMGDRLP MPHKFAFGMI LCSGAFLVLP WGASFANEQG IVSVNWLILS YALQSIGELM ISGLGLAMVA QLVPQRLMGF IMGSWFLTTA AAALIAGKVA GLTAVPGDVN DAHASLAIYS HVFMQIGIAT AVIAILMMLT APKLHRMTLD TAEDTEKKAQ AAAITN
|
| |