Gene Spro_2220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2220 
Symbol 
ID5605256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2420969 
End bp2421829 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content56% 
IMG OID640937759 
Productpyridoxamine kinase 
Protein accessionYP_001478449 
Protein GI157370460 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase 
TIGRFAM ID[TIGR00687] pyridoxal kinase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000576354 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAACA TTCTTTCTAT TCAATCCCAT GTGGTGTTTG GCCATGCAGG CAACAGCGCG 
GCAGAGTTTC CGATGCGCCG CATGGGCGTT AACGTCTGGT CGCTGAACAC CGTGCAATTT
TCCAATCATA CTCAGTACGG CAAGTGGACC GGTTGCGTGA TGCCGGCCAG CCATCTGACC
GAGATTGCCC AGGGTATTGC GGATATAGAT CAACTCAAGC ACTGCGATGC GGTGCTGAGC
GGTTATATCG GTTCGCCGGA GCAGGGCAAC CATATTCTTG AGATTGTGCG TCAGGTTAAG
CAGGCCAATC CGAACGCCTG GTATTTCTGC GATCCGGTGA TGGGTCATCC GGAAAAAGGT
TGCATCGTGG CACCGGGCGT GGCGGAGTTT CATTGTCAGC AGGCGTTGCC GTGCAGTGAC
ATGATTGCGC CCAATCTGCT GGAGCTGGAA TTGCTGAGCC AGCGTACTGT GACCAACGTG
GAGCAGGCGG TAAGCGCCGC ACGCGAGCTG ATTGCCAAAG GGCCGAAGCT GGTGCTGGTC
AAGCATCTGA GCCGTGCCGG TTATAATATC GACTGTTTCG AAATGTTGCT GATCACGGCT
AGTCAGGCCT GGCACATCAG CCGTCCGCTG GTGGACTTCG GCGAGCGTCA ACCGGTGGGT
GTAGGCGACC TGACCAGTGG TCTGTTGCTG GTTAATTTGC TCAAGGGTGA GGCGTTGGAC
AAAGCACTCG AGCACGTCAC GGCGGCGGTG TATGAAGTGA TGCTGACGAC CCAGGCGATG
GGTGAGTATG AGCTGCAGGT GGTGGCGGCT CAGGAGCGTA TTGTGCAGCC GGGCTGCGAG
TTTAAAGCGG TCATGCTGTA A
 
Protein sequence
MKNILSIQSH VVFGHAGNSA AEFPMRRMGV NVWSLNTVQF SNHTQYGKWT GCVMPASHLT 
EIAQGIADID QLKHCDAVLS GYIGSPEQGN HILEIVRQVK QANPNAWYFC DPVMGHPEKG
CIVAPGVAEF HCQQALPCSD MIAPNLLELE LLSQRTVTNV EQAVSAAREL IAKGPKLVLV
KHLSRAGYNI DCFEMLLITA SQAWHISRPL VDFGERQPVG VGDLTSGLLL VNLLKGEALD
KALEHVTAAV YEVMLTTQAM GEYELQVVAA QERIVQPGCE FKAVML