| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2218 |
|---|
| Symbol | |
|---|
| ID | 5605265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 2418836 |
|---|
| End bp | 2419489 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640937757 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase |
|---|
| Protein accession | YP_001478447 |
|---|
| Protein GI | 157370458 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
|---|
| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000558719 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAA ATAATGAATT TGATGTTGCG GACCTGCGCC GCGAATATAC CCGTGGCGGC
CTGCGCCGTA ACGATCTGAC CACCAATCCC CTGGAACTGT TCGAGCATTG GCTGAAACAG
GCCTGTGACG CCCGCCTGGC GGATCCGACC GCCATGTGCG TGGCGACGGT GGATGAAAAC
GGCCAACCTT ACCAGCGCAT TGTGTTGCTC AAGCATTTTG ATGACAAAGG GCTGGTGTTC
TACACCAATC TGGGCAGCCG CAAGGCGCAG CAACTGGCGA ATAACCCGCA CATCAGCCTG
TTGTTCCCGT GGCACATGCT TGATCGTCAG GTCATTTTCC TCGGTAAAGC GGAGCGCCTG
TCCACGTTCG AAGTTATGAA ATACTTTGCC AGCCGGCCGA AGGACAGTCA GATCGGCGCC
TGGGTCTCGC AGCAGTCATC GCGTATTTCA GCGCGCGGCG TGCTGGAGAG CAAATTCCTC
GAACTGAAGC AAAAATTCCA ACAGGGCGAA GTGCCATTGC CGAGTTTCTG GGGTGGATTC
CGGGTTAATT TCGACTCCGT CGAGTTTTGG CAGGGCGGTG CCAACCGTCT GCATGACCGT
TTCCTGTATC AACGGGACGG GAATGACTGG AAAATTGACC GACTGGCACC CTGA
|
|---|
| Protein sequence | MIENNEFDVA DLRREYTRGG LRRNDLTTNP LELFEHWLKQ ACDARLADPT AMCVATVDEN
GQPYQRIVLL KHFDDKGLVF YTNLGSRKAQ QLANNPHISL LFPWHMLDRQ VIFLGKAERL
STFEVMKYFA SRPKDSQIGA WVSQQSSRIS ARGVLESKFL ELKQKFQQGE VPLPSFWGGF
RVNFDSVEFW QGGANRLHDR FLYQRDGNDW KIDRLAP
|
|---|
| |