Gene Spro_2215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2215 
Symbol 
ID5605293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2416447 
End bp2416938 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content59% 
IMG OID640937754 
Product17 kDa surface antigen 
Protein accessionYP_001478444 
Protein GI157370455 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.443445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000529238 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACTACT ACCAACAGGA GTTTTATATG ATCAAGCGTC TTCTCGTCGT TGCCATCGCC 
GCAGTTACGC TGGCAGGGTG CGCCAATGAT TCCATGTCCG GCGACGTTTA TTCCGCTTCG
CAGGCCAAAC AGGTGCAAAC CGTGACTTAC GGCACGCTGG TTTCTGTGCG CCCGGTCAAG
ATCCAGGGTA GTGAAACATC GAACACCATT GGTGCCATCG GCGGTGCCGT GCTGGGTGGT
TTCCTCGGTA ACACCGTCGG CGGCGGCACA GGCCGTAGCC TGGCGACGGC AGCCGGCGCT
GTAGCAGGCG GCGTAGCAGG TAACAGCATC GGTGAAGCTG CCGGTCGTAC TTCAGGCTAT
GAGCTGGAAA TCAAGACCGA CCAGAAAGAG AACATCGTGG TGGTTCAGAA GGCGGGCGAC
ACCAAGTTCA GCCCAGGGCA ACGCGTTCGT ATGGCTCGCA CTGGCGACAC CATCACCGTG
TCCCCACTGT AA
 
Protein sequence
MDYYQQEFYM IKRLLVVAIA AVTLAGCAND SMSGDVYSAS QAKQVQTVTY GTLVSVRPVK 
IQGSETSNTI GAIGGAVLGG FLGNTVGGGT GRSLATAAGA VAGGVAGNSI GEAAGRTSGY
ELEIKTDQKE NIVVVQKAGD TKFSPGQRVR MARTGDTITV SPL