Gene Spro_2140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2140 
Symbol 
ID5606026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2336347 
End bp2337531 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content52% 
IMG OID640937676 
Productperiplasmic binding protein 
Protein accessionYP_001478369 
Protein GI157370380 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.07383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.925288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGCAA TTCTCATTAT TATTTCTGGA TTAATTTCCC ACGCTAAGGA GTGTTACGTG 
TACCGTCGAA TAACCTTGCT GGCTTTCGCC TGCGCCTTTT CTACACAGGT GATGGCGACC
ACTTATCCGC TCACCCTGAC CGATACCTCT GGTCAAACCC TGACGATTAA ACAAGAGCCG
AAACGCATTG TGGTGCAGGA TGGGCGCGAT ATTCTGACGT TGGCCTTGCT GGACCGTGCC
GATCCCTTTA CCCGGCTGGT GGCGTGGAAC AACCTGCTGA AGAAGAGCGA TGGTGAAACC
TGGAAAATTC TGCAAAGCAA GTGGCCAGAA GCCAAAAACG TTATCGATAT GGGGTTTAGC
GACAAGGGCG AGATTAACCT GGAGAGCGTT ATCGCCAAAC ACCCTGACCT GATGGTGGCG
CAGCTACGCT CTAAACCTTC TCTGAGCCAG ACTGGCGTAC TCGACAAGCT GCAAGCGCTG
AATATCCCGG TGTTGTTTAT CGATACCATG CTGAAACCGG TGGAGAACAC CCCGAAAAGC
ATTACCTTGC TGGGGGAAAC GCTAAACCGT GAAAGTGAAG CGAAACAGTA CACGGACTTT
TATCAGCAGC ACTATCAGAG CATCCTCGAT AAAACCAAAA CGGTAGAACC CAAGCCGCTG
GTGTTTATTG AAGCCAAAGC CGGCCTGAAC GGGCTGGAAT CCTGCTGTTT CACCCATGCA
CACGTCGGCT GGGGTGGGAT GATTGAAGCG GTAGGCGCAC GCAACGTGGG TTCTGCACTG
CTACCGGGCG CGACCGGCGA CGTATCGCTT GAGAAAGTGA TCAGCATGAA GCCGGATGCG
TATATTGTCT CCGGTTCCCA GTGGGCCAGT AAAACCAACG CCGCGGTGCC TTTTGGCTAT
GGTGTGACGC AACAGCAGGT GGATGCTGCA TTTAACCGGA TGAAACAGCG CCCAGGCTTT
GCCCAGCTTT CGGCGGTAAA AGACGGTCGC TTCTACGGCA TCTATCACAA TTTCTATAAC
CACCCGTACA ATATCGTTGG GCTGGAGTAT TTGGCGAAGT TTATCTACCC GAACCAGTTC
AAGGATTTGG ATCCGGCGAA AACCTACAGC GAGATCCTCA GTCGTTTTAC CGAAGTGCCG
GAAGGCAAGG GCATTTTAGG CGCGCAGGCG CCAACAGGTA AGTAA
 
Protein sequence
MGAILIIISG LISHAKECYV YRRITLLAFA CAFSTQVMAT TYPLTLTDTS GQTLTIKQEP 
KRIVVQDGRD ILTLALLDRA DPFTRLVAWN NLLKKSDGET WKILQSKWPE AKNVIDMGFS
DKGEINLESV IAKHPDLMVA QLRSKPSLSQ TGVLDKLQAL NIPVLFIDTM LKPVENTPKS
ITLLGETLNR ESEAKQYTDF YQQHYQSILD KTKTVEPKPL VFIEAKAGLN GLESCCFTHA
HVGWGGMIEA VGARNVGSAL LPGATGDVSL EKVISMKPDA YIVSGSQWAS KTNAAVPFGY
GVTQQQVDAA FNRMKQRPGF AQLSAVKDGR FYGIYHNFYN HPYNIVGLEY LAKFIYPNQF
KDLDPAKTYS EILSRFTEVP EGKGILGAQA PTGK