Gene Spro_2122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2122 
Symbol 
ID5606134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2317924 
End bp2318715 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content54% 
IMG OID640937658 
ProductIclR family transcriptional regulator 
Protein accessionYP_001478351 
Protein GI157370362 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000124752 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000111832 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGTTAACG CAGACTCAGA TAAACAACCG GATGCAGTTT CATCCGTACT GAAGGTATTC 
GGTATCTTGC AGGCGCTGGG CGAAGAACGT GAAATTGGCA TAACCGAGCT TTCCCAGCGG
GTGATGATGT CCAAGAGCAC CGTCTACCGT TTTCTGCAGA CCATGAAGTC ATTGGGCTAT
GTTTCGCAGG AGGGTGAGTC GGAAAAATAC GCGCTCACGC TCAAGCTGTT TGAACTGGGG
GCCAAGTCGC TGCAAAGCGT CGATCTGATC CGCAGCGCCG ATATCCAGAT GCGCGAACTG
TCGAGCCACA CCCGCGAAGC TATTCACCTC GGGGCGCTGG ATGAGGACAG TATTGTCTAT
ATCCATAAAA TCGATGCCAT GTATAACCTG CGTATGTATT CGCGTATTGG TCGTCGCAAC
CCGCTGCACA GTACGGCGAT CGGTAAAGTG CTGTTAGCCT GGCGCGACCG GGCTGAAGTG
GCGCAAATCC TGTCAAAAAT TGAGTTTACC CGCAGCACCC CGAACACCCT GACCGATGCC
GCGGCCTTGA TGTCGCAACT GGAGCAGGTG CGTGAGCAGG GGGTGGGTGA AGACATTGAA
GAGCAGGAAG AAGGGTTGCG CTGCATTGCG GTGCCGGTGT TTGACCGTTT TGGCGTGGTA
ACCGCCGGTC TGAGTATCTC GTTCCCGTCC ATTCGTTACT CGGAGGATGC CAAAGCCGAT
TACGTCAAAC GTCTGCATAC CGCCGCCCGC AACATTTCCG AGCAAATGGG TTATCACCAC
TATCCATTCT GA
 
Protein sequence
MVNADSDKQP DAVSSVLKVF GILQALGEER EIGITELSQR VMMSKSTVYR FLQTMKSLGY 
VSQEGESEKY ALTLKLFELG AKSLQSVDLI RSADIQMREL SSHTREAIHL GALDEDSIVY
IHKIDAMYNL RMYSRIGRRN PLHSTAIGKV LLAWRDRAEV AQILSKIEFT RSTPNTLTDA
AALMSQLEQV REQGVGEDIE EQEEGLRCIA VPVFDRFGVV TAGLSISFPS IRYSEDAKAD
YVKRLHTAAR NISEQMGYHH YPF