Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2122 |
Symbol | |
ID | 5606134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 2317924 |
End bp | 2318715 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640937658 |
Product | IclR family transcriptional regulator |
Protein accession | YP_001478351 |
Protein GI | 157370362 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000124752 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000111832 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGTTAACG CAGACTCAGA TAAACAACCG GATGCAGTTT CATCCGTACT GAAGGTATTC GGTATCTTGC AGGCGCTGGG CGAAGAACGT GAAATTGGCA TAACCGAGCT TTCCCAGCGG GTGATGATGT CCAAGAGCAC CGTCTACCGT TTTCTGCAGA CCATGAAGTC ATTGGGCTAT GTTTCGCAGG AGGGTGAGTC GGAAAAATAC GCGCTCACGC TCAAGCTGTT TGAACTGGGG GCCAAGTCGC TGCAAAGCGT CGATCTGATC CGCAGCGCCG ATATCCAGAT GCGCGAACTG TCGAGCCACA CCCGCGAAGC TATTCACCTC GGGGCGCTGG ATGAGGACAG TATTGTCTAT ATCCATAAAA TCGATGCCAT GTATAACCTG CGTATGTATT CGCGTATTGG TCGTCGCAAC CCGCTGCACA GTACGGCGAT CGGTAAAGTG CTGTTAGCCT GGCGCGACCG GGCTGAAGTG GCGCAAATCC TGTCAAAAAT TGAGTTTACC CGCAGCACCC CGAACACCCT GACCGATGCC GCGGCCTTGA TGTCGCAACT GGAGCAGGTG CGTGAGCAGG GGGTGGGTGA AGACATTGAA GAGCAGGAAG AAGGGTTGCG CTGCATTGCG GTGCCGGTGT TTGACCGTTT TGGCGTGGTA ACCGCCGGTC TGAGTATCTC GTTCCCGTCC ATTCGTTACT CGGAGGATGC CAAAGCCGAT TACGTCAAAC GTCTGCATAC CGCCGCCCGC AACATTTCCG AGCAAATGGG TTATCACCAC TATCCATTCT GA
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Protein sequence | MVNADSDKQP DAVSSVLKVF GILQALGEER EIGITELSQR VMMSKSTVYR FLQTMKSLGY VSQEGESEKY ALTLKLFELG AKSLQSVDLI RSADIQMREL SSHTREAIHL GALDEDSIVY IHKIDAMYNL RMYSRIGRRN PLHSTAIGKV LLAWRDRAEV AQILSKIEFT RSTPNTLTDA AALMSQLEQV REQGVGEDIE EQEEGLRCIA VPVFDRFGVV TAGLSISFPS IRYSEDAKAD YVKRLHTAAR NISEQMGYHH YPF
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