Gene Spro_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2109 
Symbol 
ID5606281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2303417 
End bp2304181 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content58% 
IMG OID640937647 
Productputative chaperone protein 
Protein accessionYP_001478340 
Protein GI157370351 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3121] P pilus assembly protein, chaperone PapD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0024073 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTATAC CCTTCCGACT GCCATTGACG GCAGCGCTGC TGATTGTCGG CCAACAACAG 
GCGCTTGCCG CCGCCTCGAT CCTGATTTGG CCCATTGACC CGGTAATTGA AGATCAACAG
CCTGCTACGG CACTGTGGCT GGAAAACCGC GATACCAAAC CCGTCTATAT GCAAGTTCGC
GTACTCGGCT GGAAACAAAC CGCCGGCAAA GACGATTACA GCAACCAGAG CGAAGTGATC
GCCAGCCCGC CGGTAGCCTC TATTGCCCCA GGCAAACGCC AACTGATCCG GCTGGTTAAG
CAAACCCCGC CGCCTGCCGG CCAGGAGCGT GCCTACCGTA TTCTGATTGA TGAAGTCCCG
GTGAAAGATT CAGGCAACCC ATCCGCACCA GATGGCGCAC AAATGGGATT GAAATTCCAG
ATGCGCTATT CGGTACCGCT GTTTGTCAGC GGCAAGGGCG TCTGGACCAA GCAGGATTCA
GAGAAGCCGC GCGATTATGC CACCGCCAGT CAACCGCAAC TCAGCTACCG GCTGTTGCAG
CAAAGCAGCC AGCGCTGGCT GGAGGTACGC AACCAGGGCA CGGTGCATGC GCGCATCTCC
AAAGTGACGA TGCAGGGGAA GACGCTCAAT GCCGGCCTGA TGGGTTACGT ATTACCCGGC
TCGCAGATGC GCTTTGCCGT ACCGGCCTCT GGCAGCTTCA GCAGCGGTCA ACTGCAAGCC
ACGGTCAACG ACAATAAACA GCCAATAACC CTGCCTGCTT ACTGA
 
Protein sequence
MRIPFRLPLT AALLIVGQQQ ALAAASILIW PIDPVIEDQQ PATALWLENR DTKPVYMQVR 
VLGWKQTAGK DDYSNQSEVI ASPPVASIAP GKRQLIRLVK QTPPPAGQER AYRILIDEVP
VKDSGNPSAP DGAQMGLKFQ MRYSVPLFVS GKGVWTKQDS EKPRDYATAS QPQLSYRLLQ
QSSQRWLEVR NQGTVHARIS KVTMQGKTLN AGLMGYVLPG SQMRFAVPAS GSFSSGQLQA
TVNDNKQPIT LPAY