Gene Spro_2059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2059 
Symbol 
ID5606951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2251832 
End bp2252476 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content52% 
IMG OID640937597 
Productpentapeptide repeat-containing protein 
Protein accessionYP_001478290 
Protein GI157370301 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.361738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGA AGTTGGATGG TGAAAAGATT GCTCGTAACC GGTTTACCGG CGAAAAAATT 
GAAAACGGCA GCTTTATCAA CTGCGATTTT TCGGGCACCG ACCTGACGGG GACCGAATTT
ATCGACTGTC AGTTTTATGA CCGCGAGAGC CAACAGGGCG GTAATTTCAG CCGTGCCTTA
TTGAAGGATG CCAGCTTCAA AAACTGTGAC CTGTCGATGG CGGACTTCAG AAATGCCAGC
GCGTTAGGTA TCGAAATCCG TGAGTGCCGG GCACAGGGCG CAGACTTTCG CGGCACCAGC
TTTATGAATA TGATCACCCC ACGCACCTGG TTTTGCAGCG CATACATCAC CAAAAGCAAC
CTGAGCTACG CCAATTTTTC GAAAGTGGTA CTGGAGAAGT GCGAGCTGTG GGAAAACCGC
TGGAACAGTG CACAGATCCT GGGGGCGACT TTTAGCGGTT CGGATCTTTC CGGTGGCGAG
TTTGCGTCGT TTGATTGGCG TGCCGCCAAC TTTACCCATT GTGATTTGAC CAACTCGGAA
TTGGGTGAGT TGGATCTGCG CAGCACCGAT CTGCAGGGCG TGAAGCTGGA CAGTTATCAG
GTGTTTCAGA TGATGGAGCG GCTGGGCATT GCGGTTATTG GCTAA
 
Protein sequence
MTLKLDGEKI ARNRFTGEKI ENGSFINCDF SGTDLTGTEF IDCQFYDRES QQGGNFSRAL 
LKDASFKNCD LSMADFRNAS ALGIEIRECR AQGADFRGTS FMNMITPRTW FCSAYITKSN
LSYANFSKVV LEKCELWENR WNSAQILGAT FSGSDLSGGE FASFDWRAAN FTHCDLTNSE
LGELDLRSTD LQGVKLDSYQ VFQMMERLGI AVIG