Gene Spro_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2020 
Symbol 
ID5607456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2214021 
End bp2215391 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content56% 
IMG OID640937558 
Productadenylosuccinate lyase 
Protein accessionYP_001478251 
Protein GI157370262 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR00928] adenylosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.581783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.312762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTAT CCTCACTGAC CGCCGTTTCA CCCGTTGATG GACGCTACGG TGATAAAGTC 
AGCGCACTGC GCACCATTTT CAGCGAGTAC GGTCTGCTGA AATTCCGTGT GCAGGTTGAA
GTACGTTGGC TGCAAAAACT GGCCGCCTGC GCAGAAATCA GGGAAGTTCC GGCTTTTGAC
GCCGACGCAA ACGCTTTCCT CGACAAGATC GTCGCAGAGT TCAGCGAAGA AGACGCGCAG
CGTATCAAGA CTATCGAACG CACCACCAAC CACGACGTAA AAGCGGTTGA GTATTTCCTG
AAGGAAAAAG TGGAAGCGAT CCCTGCCCTG CAGGCGGTGT CCGAGTTTAT CCACTTTGCT
TGTACCTCCG AAGACATCAA CAACCTGTCG CACGCGCTGA TGCTGCAAAC GGCACGTCAG
GACGTGGTGC TGCCGTACTG GCGTAAAATC ATTGATTCGA TCAAGGGCCT GGCGCTGGAA
TACCGCGATA TTCCGCTGCT GTCTCGTACC CATGGCCAAC CGGCCACCCC GTCCACCGTC
GGTAAAGAAT TCGCCAACGT CGCCTACCGC ATGGAGCGTC AATTCCGTCA GCTTGAGCGC
GTGGAAATCA TGGGCAAGAT CAACGGCGCA GTCGGCAACT ATAACGCCCA CATCGTCGCT
TACCCGGAAG TGGACTGGCA TGTGTTCAGC GAAGAGTTTG TTACCTCGCT GGGCATTATC
TGGAACCCGT ACACCACTCA GATCGAGCCG CACGACTATA TCGCCGAGCT GTTTGACTGC
GTTGCGCGTT TCAACACCAT CCTGATCGAC TTCGACCGTG ATATCTGGGG CTACATCGCC
CTGAATCACT TCAAGCAGAA GACCATCGCC GGTGAAATCG GTTCTTCTAC CATGCCGCAC
AAGGTTAACC CAATCGACTT CGAAAACTCC GAAGGCAACC TGGGCCTGTC AAACGCGGTA
CTGGGCCATC TGGCCAGCAA ACTGCCGGTT TCCCGCTGGC AGCGCGACCT GACGGACTCC
ACCGTGCTGC GCAACCTGGG CGTTGGCCTG GGTTATGCGT TGATCGCCTA CCAGGCGACC
ATGAAAGGCA TCAGCAAGCT GGAAGTGAAC CAGGCACACC TGCTGGACGA ACTGGATCAC
AACTGGGAAG TGTTGGCCGA GCCGATCCAA ACCGTGATGC GCCGTTACGG CATCGAAAAG
CCGTACGAGA AACTGAAAGA GCTGACTCGC GGCAAGCGTG TGGATGCAGC CGGCATGCAG
ACGTTTATCG ATAGCCTGGC GTTGCCGGAA GAAGAGAAAA CTCGTCTGAA AGCCATGACC
CCGGCTAATT ACATTGGCCG CGCGGCGAGC ATGGTCGATG AATTGAAGTA A
 
Protein sequence
MELSSLTAVS PVDGRYGDKV SALRTIFSEY GLLKFRVQVE VRWLQKLAAC AEIREVPAFD 
ADANAFLDKI VAEFSEEDAQ RIKTIERTTN HDVKAVEYFL KEKVEAIPAL QAVSEFIHFA
CTSEDINNLS HALMLQTARQ DVVLPYWRKI IDSIKGLALE YRDIPLLSRT HGQPATPSTV
GKEFANVAYR MERQFRQLER VEIMGKINGA VGNYNAHIVA YPEVDWHVFS EEFVTSLGII
WNPYTTQIEP HDYIAELFDC VARFNTILID FDRDIWGYIA LNHFKQKTIA GEIGSSTMPH
KVNPIDFENS EGNLGLSNAV LGHLASKLPV SRWQRDLTDS TVLRNLGVGL GYALIAYQAT
MKGISKLEVN QAHLLDELDH NWEVLAEPIQ TVMRRYGIEK PYEKLKELTR GKRVDAAGMQ
TFIDSLALPE EEKTRLKAMT PANYIGRAAS MVDELK