Gene Spro_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2013 
Symbol 
ID5603985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2206069 
End bp2206740 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content55% 
IMG OID640937551 
ProductDNA-binding transcriptional regulator PhoP 
Protein accessionYP_001478244 
Protein GI157370255 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.067134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTAC TGGTTGTTGA AGATAATGGT TTACTGCGCC ACCACCTCTC CGTACAGATG 
CGTGAAATGG GTCATCAGGT TGATGCAGCA GAAGATGCCA AGGAAGCCGA TTATTTCCTA
CAGGAACATG CGCCGGACAT CGCGATTGTC GATCTCGGCC TGCCGGGTGA AGACGGCCTG
AGCCTGATCC GCCGCTGGCG CGCCCACCAA ATGAAATTAC CGATCCTGGT GCTGACCGCC
CGTGAAAGCT GGCAAGACAA GGTAGCGGTG CTGGAAGCCG GTGCCGATGA CTACGTCACC
AAGCCGTTTC ATTTGGAAGA AGTGATTGCC CGCATGCAGG CGTTGATGCG CCGTAACAGC
GGCCTGGCTT CCCAGGTGAT CGTCTTGCCG CCGTTCCAAA TCGACCTTTC GCGCCGTGAG
CTGAGCGTCA ACGAGCAGCA AATCAAACTG ACCGCATTTG AATACACCAT TATCGAAACC
TTAATCCGCA ACGCGGGTAA AGTGGTCAGT AAAGACTCGC TGATGTTGCA GTTGTATCCG
GATGCCGAGC TGCGTGAAAG CCACACCATC GACGTACTGA TGGGCCGTTT GCGTAAAAAG
GTGCAGGCCG AATACCCACA GGAAGTGATC ACCACGGTTC GTGGCCAGGG CTATCGTTTT
GATGCGAAGT GA
 
Protein sequence
MRVLVVEDNG LLRHHLSVQM REMGHQVDAA EDAKEADYFL QEHAPDIAIV DLGLPGEDGL 
SLIRRWRAHQ MKLPILVLTA RESWQDKVAV LEAGADDYVT KPFHLEEVIA RMQALMRRNS
GLASQVIVLP PFQIDLSRRE LSVNEQQIKL TAFEYTIIET LIRNAGKVVS KDSLMLQLYP
DAELRESHTI DVLMGRLRKK VQAEYPQEVI TTVRGQGYRF DAK