Gene Spro_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2005 
Symbol 
ID5602694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2195933 
End bp2196769 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content59% 
IMG OID640937543 
ProductNAD-dependent deacetylase 
Protein accessionYP_001478236 
Protein GI157370247 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0489143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACTC GCCATCGGCT GTGTCAGTTT CGCAAGAGTA AGCATGTGCT GCATCAGCGC 
TTTCGTTCGC GGATATTTCA TCGCGACACC ATGGCGGCGG CCGAGCTGAA AAAGCCGTTT
GTCGTGGTGT TGACCGGGGC CGGGATCTCG GCCGAGTCGG GTATTCGCAC CTTCCGCGCT
GCCGACGGGC TGTGGGAAGA GCACCGGGTA GAAGACGTTG CCACACCGGA AGGTTACCAG
CGCGATCCGC AGCTGGTTCA GACGTTTTAC AATGAGCGTC GCCGCCAGCT GCAGTCGCCG
GAGATTGCGC CTAATGCCGC ACACCGTGCC CTGGCAGATC TCGAAGCCTG GCTGGGGGAT
AACTTCCTGC TGGTGACGCA GAATATCGAT AATCTGCACG AACGTGCCGG TAGCACCCGA
GTGTTGCATA TGCACGGCGA ACTGCTGAAA GTGCGCTGCA CTAGTTCCGG GCAGGTGTTT
GACTGGCCAG AAGATCTCAG CGTCGACGAT CGCTGCCATT GCTGCCAGTT CCCGGCACCG
TTGCGGCCAC ACATAGTATG GTTCGGCGAA ATGCCGCTGG GCATGGATGA AATTTATCAG
GCGCTGGCCA AGGCCGACTT TTTCGTGGCT ATCGGCACCT CAGGCCACGT TTACCCGGCC
GCCGGTTTTG TGCATGAGGC CCGGTTGGGC GGGGCGCATA CCATGGAGCT GAATCTGGAA
CCCAGCCAGG TGGAGAGCCA GTTTGATGAA AAACACTATG GCCAGGCCAG CGCAGTGGTG
CCACGGTTTG TGCATAAATT TCTGGTCGGC AAGGTAGCAC GAGCGGACCA GCCATAA
 
Protein sequence
MHTRHRLCQF RKSKHVLHQR FRSRIFHRDT MAAAELKKPF VVVLTGAGIS AESGIRTFRA 
ADGLWEEHRV EDVATPEGYQ RDPQLVQTFY NERRRQLQSP EIAPNAAHRA LADLEAWLGD
NFLLVTQNID NLHERAGSTR VLHMHGELLK VRCTSSGQVF DWPEDLSVDD RCHCCQFPAP
LRPHIVWFGE MPLGMDEIYQ ALAKADFFVA IGTSGHVYPA AGFVHEARLG GAHTMELNLE
PSQVESQFDE KHYGQASAVV PRFVHKFLVG KVARADQP