Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1980 |
Symbol | |
ID | 5603337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 2166554 |
End bp | 2167957 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640937518 |
Product | hypothetical protein |
Protein accession | YP_001478211 |
Protein GI | 157370222 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00207336 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCACGCCT ACGAACTTGG CCGAAAACTG GCAGCCCTAT CGGACCGGGC CAGAGCGGCC CTCTCTGGAA TTGAAATCAA TCAGGCAGAT GCTCGCCACC TGCAACTGGT GCTGAAACAG CAAATCGCCA GCCTCTATCA CCAGATGGCC ACAGTACTTC TGAAAGAATC TCCTCGCGTT GGCGAAATGG CAAACGTGCA GAAATTACTA AATAAACTTC AGCAAGAGAT TGCCCAGTCT CAACAGGCCT TACAGCTCAG CGAGAAAGAA ATCGAGAACC GACATGCTCA GTTGCAACAG TTGCATGTAG AAATAAATCG GCAAGAAGAT GAACGAGATC GGCAACTACA ACAAAATATT GATGCTGTAG CAGCCAGGCA GTTGATGGTT AAAAGCAGTC AGGATGTCGG CCAACAGGAA AACAGCCATA AGGAATTAAT GGCTGAAACG ACCACCAAGC TAGGGGAGTA CCATCAGCAA CGCATTTTCA TGTTCCTGGA GAGAAAAGGC TATGGGCAAC CGGGATATTC AGCCTGGCCG CTGTCGCGCA ATCTCGATAG CTGGCTGGCA CGAATTAGCC ACTATCCGAA CAACGCAGCC AATTACCGGA TGCTCCTGGC ACTGCAAAAG GAATCTACTC GGCGTCTGCT GGAGTTGCAC AATCAAACCA AGCAACAGAC CAATGAATAT CAACAATATG TACAAGACGT CGAACAGAAT CTACAGCTGC CCACGCTGTA TCTGAATCTC AACGCGCTAG AAAAAATACT GAGTTCCACA CAACAAGAAA TCCGCAACCA GCAAAATAAG CTGCAGGAAT ACGCTCAGGG CGAAGGTGAG ACTTACAGCC AGATAACAAC ACAGCTCTCG GCGCAAATGG CCTTATTGCC TCTGGATAAA TTGGATATTC TGGTGGCGAA AACCGAGACG CCGACTGACG ATCGCCTGTT GGAAGAGCTG AGAGAACTAC AGCTTGAAGA GATAGCGGTC GAAGAGAACC TGCTACAGCA AGAGATCGAC GCTCAATTAG CCCAGCGCCG TGCCACTGCC GCCATCGAAT TGAACAATCA ATTTTCGGCG CAGGGATATG ACAATCCGAT TTATGAGTAC CAATGGAGAT GGTCAGATAA ACCGGAGGAA CTGTTTGAAA ACTACCTGTC CGGTGCCATC AGTCTGAAAG CGGTATTGCA TAAGTTGGAT ATGATTACCC ACCGACTCCC ACCACCATCG GTAACTGCCA GAGCCTCGTC CGGTTCGTGG GGAAATTCAT CCGCACGGAG CTATTCGTCT GGCGTCGGAT ATAGTTCTTC ATCTTCATCG TCCTCTTCCG GCAGCGGTGG TAGTGGCTTC AGTTCTTCTT CTTCAACCGG CGGTGGCGGG TTCCGCACTA CGGATAGTTT CTAA
|
Protein sequence | MHAYELGRKL AALSDRARAA LSGIEINQAD ARHLQLVLKQ QIASLYHQMA TVLLKESPRV GEMANVQKLL NKLQQEIAQS QQALQLSEKE IENRHAQLQQ LHVEINRQED ERDRQLQQNI DAVAARQLMV KSSQDVGQQE NSHKELMAET TTKLGEYHQQ RIFMFLERKG YGQPGYSAWP LSRNLDSWLA RISHYPNNAA NYRMLLALQK ESTRRLLELH NQTKQQTNEY QQYVQDVEQN LQLPTLYLNL NALEKILSST QQEIRNQQNK LQEYAQGEGE TYSQITTQLS AQMALLPLDK LDILVAKTET PTDDRLLEEL RELQLEEIAV EENLLQQEID AQLAQRRATA AIELNNQFSA QGYDNPIYEY QWRWSDKPEE LFENYLSGAI SLKAVLHKLD MITHRLPPPS VTARASSGSW GNSSARSYSS GVGYSSSSSS SSSGSGGSGF SSSSSTGGGG FRTTDSF
|
| |