| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1964 |
|---|
| Symbol | |
|---|
| ID | 5607309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 2146276 |
|---|
| End bp | 2147193 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640937502 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_001478195 |
|---|
| Protein GI | 157370206 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0494168 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACT TAAAAAGAAT CGTACTGGTG GCGGCGCTCG GCTGCTCCAC CTCAGTGTTG
GCGGAAACCA TCGGCGTGTC GATGGCCTAT TTTGACCAGA ACTTCCTGAC CATTATTCGT
CATTCAATCG ACAAAGAGGC CAAGGCGCGC GGAATCAGCG TGCAGTTCGA AGACGCACGC
GGTGACGTAG GTCGCCAGGC CGATCAGGTG CAGAACTTTA TCAGCGCCGG GGTGGACGCG
ATTATTGTCG ATCCGGTCAA TTCGGCGGGT ACGCCAGCCA TCACCAAAAT GGTGACCAAA
GCGGGCATTC CGCTGGTGTA CGTGAATCGT ACGCCGGGCG ACAGCAAACT GCCTGCCGGC
GTGGTGTTTG TCGGCTCCGA CGAGAAGCAA TCCGGCACCT TGCAAATGGA AGAACTGGCG
CGGCTGGCCA ACTATCAGGG CAACGTGGCG GTGATGATCG GCAACCTTAC CGACGCCGGT
GCACTGCAAC GCACCAAGGA TGTAGAGCAG GTGGTGGCGA AGTACCCGAA AATGAAGGTG
GTGCAAAAGC AGAGCGCCAA CTACTCGCGC AGCGAAGGGA TGGATCTGAT GCTGAACTGG
ATCACCAACG GCGAGTCTAT TGATATCGTC GCCGCCAATA ATGACGAGAT GGCGATTGGC
GCGATCATGG CGTTGCAGCA GGCCGGTAAG CAGGGCAGCA AGGTGCTGGT TGGCGGTATC
GACGCCACGC CGGACGGCCT CAAGGCGTTA TCTTCCGGCA AGATGCAGGT GACGGTATTT
CAGGATGCCG TTGGTCAGGG CAAAGCCTCG GTTGACGTCG CGCAGCGCAT GATCAAAGGC
GAAAAGCTGG ATCCCTATTA TTGGATCCCG TTTGAACTGG TGACCCCGGC CAATATGCAA
AAGTACGCGG CGAAATAA
|
|---|
| Protein sequence | MKYLKRIVLV AALGCSTSVL AETIGVSMAY FDQNFLTIIR HSIDKEAKAR GISVQFEDAR
GDVGRQADQV QNFISAGVDA IIVDPVNSAG TPAITKMVTK AGIPLVYVNR TPGDSKLPAG
VVFVGSDEKQ SGTLQMEELA RLANYQGNVA VMIGNLTDAG ALQRTKDVEQ VVAKYPKMKV
VQKQSANYSR SEGMDLMLNW ITNGESIDIV AANNDEMAIG AIMALQQAGK QGSKVLVGGI
DATPDGLKAL SSGKMQVTVF QDAVGQGKAS VDVAQRMIKG EKLDPYYWIP FELVTPANMQ
KYAAK
|
|---|
| |