Gene Spro_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1959 
Symbol 
ID5607074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2139576 
End bp2141177 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content55% 
IMG OID640937497 
Productsensory histidine kinase DcuS 
Protein accessionYP_001478190 
Protein GI157370201 
COG category[T] Signal transduction mechanisms 
COG ID[COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00516955 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAAAAC AACGGATACC GCTTAAGCTC AGCACCACGC TCACGCTGAT GGTGTCTGCC 
ATCATCGCTT CGGTGCTATT GGTGGTATAT GCGCTGTTTT TTGTGCAGAT GAATCACCAG
GGACAAGATC AGCAACGCCA AAAAGCGATG GCGATTGCCG AAACGCTGGC GCTATCGAGT
AATGTTATTG AGGGGTTGCT GCGTGAAGAT CACAGTGGCG CGGTGCAGCG CTTTGCCGAG
CAGGTGCGCC AGCGGAATGA ATTACTGTTT GTCGTCGTGG TGGACATGAA AGGTATCCGC
TACTCGCACC CCAAACCCTG GTTAATCGGT CAGCATTTTA TCGGTGACGA TTTGGAACCG
GCGCTACGCG GCGAAACCAA CAGCGCCATT AATCGCGGCG CATTAGCCCC TTCGCTGCGG
GTTTTTGCCC CGGTTTACGA CAGCGAACGG CGGCAGATTG GCGTGGTCGC TCTCGGTATT
GCGCTCGACA CCGTTCAGCG CGTGGTGGGC GAAAGCCGCT GGATCATCTA CTGGACACTG
GCCTTCGCCG CGCTGGTCGG CACGCTCGGC ATTTTCTTCC TGGTGAAGGC CCTGAAACGC
ATTATGCTCG GCTTTGAACC CTACGAGATC TCTAATCTGT TCGAGCAGCG CAACGCCATG
CTGCAATCAA TTAAAGAAGG CGTCATTGCG GTCGATAACC AGTCACGCAT TACCATTGTC
AACGACGAAG CCAAACGGCT GTTGCGCCAA AATGGGCCTT TCGAAAACCT GCTGTTGGAA
TCCGCCAGCA AATACTGGCC GACGCAGCTG CATCTGGCGG AGGTGCTGGA AAGCGGTCAA
CCGCTGCGTG ACCAGCAGAT CAGCTTTAAC GGCAGCGAAC TGCTGACCAA TACCGTGCCG
GTAATCGTTA AGGGCCAGGT GATTGGTGCT ATCGCCACCT TCCGCGATAA AACCGAAATC
AGCCAGTTGG TGCAACGCCT GAGCGGCATG GCGCACTATG CCGACGCATT GCGCGTCCAG
TCACATGAGT TTATGAACAA GCTGCATGTG ATCCTCGGTA TGCTGCACAT GAAGGCCTAC
CAGCAGTTGG AAAACTACAT CATCAATACT GCCAGCACCT ATCAGGAAGA GATCGGTGCG
CTGCTGAGGA AAATCCAGTC GCCAGAGGTG GCGGGCTTCT TTATCGGCAA GATCAATCGC
GCCCATGAAG CCGGTATTGA GCTGACCATT GACGAAACCA GCCTGCTACC AGAAACCGAC
GATGCGGAAA CTACCCACGT GCTGATCAGC GTGCTGGGCA ATTTGATTGA AAATGCCATT
GACGCTATCG ATGGCGTAGA GGGGCACGAG ATCAACCTGA GCTTTCATCA CAATGAGAAT
CACTTACACT GTATAGTCAG CGATGACGGC CCCGGTATCG ATCCGGCTCT CGGCGCACGT
ATCTTTGAAC AGGGAGTTTC AACCAAAGGG CCGGGGCGCG GTATTGGGCT GGCGTTGATC
CGCAGCAGCC TGGAAAAACT GGGCGGCAGC ATTGATTTCG AATCTGAACC GGGTGAGCTA
ACCCAATTTT TTGTACATAT CCCCTATCAG GCCAAGGGCT GA
 
Protein sequence
MPKQRIPLKL STTLTLMVSA IIASVLLVVY ALFFVQMNHQ GQDQQRQKAM AIAETLALSS 
NVIEGLLRED HSGAVQRFAE QVRQRNELLF VVVVDMKGIR YSHPKPWLIG QHFIGDDLEP
ALRGETNSAI NRGALAPSLR VFAPVYDSER RQIGVVALGI ALDTVQRVVG ESRWIIYWTL
AFAALVGTLG IFFLVKALKR IMLGFEPYEI SNLFEQRNAM LQSIKEGVIA VDNQSRITIV
NDEAKRLLRQ NGPFENLLLE SASKYWPTQL HLAEVLESGQ PLRDQQISFN GSELLTNTVP
VIVKGQVIGA IATFRDKTEI SQLVQRLSGM AHYADALRVQ SHEFMNKLHV ILGMLHMKAY
QQLENYIINT ASTYQEEIGA LLRKIQSPEV AGFFIGKINR AHEAGIELTI DETSLLPETD
DAETTHVLIS VLGNLIENAI DAIDGVEGHE INLSFHHNEN HLHCIVSDDG PGIDPALGAR
IFEQGVSTKG PGRGIGLALI RSSLEKLGGS IDFESEPGEL TQFFVHIPYQ AKG