Gene Spro_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1940 
Symbol 
ID5606932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2125212 
End bp2126165 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content58% 
IMG OID640937478 
Productproline iminopeptidase 
Protein accessionYP_001478171 
Protein GI157370182 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR01249] proline iminopeptidase, Neisseria-type subfamily 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00361312 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACAAT TAAGAGGTTT ATACCCGCCG TTAGCAGCAT ACGACAGCGG TTGGCTGGAC 
ACTGGAGATG GCCACCGGAT CTACTGGGAG CTGAGCGGCA ACCCACAGGG TAAGCCGGCC
GTCTTTATTC ACGGCGGGCC GGGCGGTGGC ATTTCCCCTT ATCATCGCCA ACTGTTCGAT
CCGCAGCGTT ATAAGGTGTT GCTGTTCGAT CAGCGTGGCT GCGGCCGTTC CAAACCGCAC
GCCAGTCTGG ACAACAACAC CACCTGGCAT CTGGTGCAGG ACATTGAACG GCTGCGCGAA
ATGGCCGGTG TCGATCAGTG GCTGGTGTTT GGCGGTTCCT GGGGTTCGAC GCTAGCCTTG
GCCTACGCGC AAACCCACCC GCAGCGCGTT AGCGAAATGG TGCTGCGCGG CATCTTCACA
CTGCGTAAGC AGGAACTGCA TTGGTATTAT CAGGATGGTG CGTCACGTTT CTTCCCGGAG
AAATGGGAGC GCGTGTTGTC GATTCTGTCA GAGGAAGAGC GTAAGGATGT GATTGCGTCT
TATCGCCAGC GCCTGACCTC ACCGGATCTG CAGGTGCAGC TTGAGGCAGC GAAGCTGTGG
AGCGTGTGGG AAGGGGAGAC GGTGACCTTG CTGCCAAGCA GCGAGTCGGC ATCTTTTGGT
GAAGATGACT TTGCGCTGGC GTTTGCCCGC ATAGAAAACC ACTATTTCAC TCATCTGGGC
TTCCTGGAGA GCGACGACCA ACTGCTGCGC AATGTCCCGC TGATCCGCCA TATTCCGGCG
GTGATTATCC ATGGTCGCTA CGATATGGCT TGCCAGGTGC AAAACGCCTG GGATCTGGCC
AAGGCCTGGC CGGAGGCGGA ACTGCATATC GTCGAGGGAG CCGGACACTC GTTTGACGAA
CCGGGTATCC TGCATCAACT GATGCTGGCC ACCGACAGGT TTGCTGCCAA GTGA
 
Protein sequence
MEQLRGLYPP LAAYDSGWLD TGDGHRIYWE LSGNPQGKPA VFIHGGPGGG ISPYHRQLFD 
PQRYKVLLFD QRGCGRSKPH ASLDNNTTWH LVQDIERLRE MAGVDQWLVF GGSWGSTLAL
AYAQTHPQRV SEMVLRGIFT LRKQELHWYY QDGASRFFPE KWERVLSILS EEERKDVIAS
YRQRLTSPDL QVQLEAAKLW SVWEGETVTL LPSSESASFG EDDFALAFAR IENHYFTHLG
FLESDDQLLR NVPLIRHIPA VIIHGRYDMA CQVQNAWDLA KAWPEAELHI VEGAGHSFDE
PGILHQLMLA TDRFAAK