Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1899 |
Symbol | |
ID | 5606415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 2084685 |
End bp | 2085647 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640937435 |
Product | 23S rRNA pseudouridylate synthase C |
Protein accession | YP_001478130 |
Protein GI | 157370141 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000584108 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000501686 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAACGA ACATTCCTGC AGTACAACTA ATCACGATTT CTGACGACGA AGCCGGTCAG CGAATCGACA ACTTTCTACT TGCCCGCTTA AAAGGCGTGC CGAAGAGCAT GATTTATCGC ATCGTGCGCA AGGGTGAGGT GCGAGTTAAT AAAGGACGCA TCAAGGCGGA ATACAAGCTG GCGCCCGGTG ATGTGGTGCG TGTGCCGCCA GTGCGTGTTG CTGAGCGTGA AGATGCGCCG GTCTCGGCCA AACTGGATAA AGTGGCCGCG CTGGCCCATT GCATTCTGTA TGAAGACGAT CACCTGCTGC TGCTGAATAA ACCCTCCGGC ACTGCGGTGC ATGGCGGTAG CGGCCTGAGT TTTGGCGTCA TCGAAGCTCT GCGTGCGTTG CGCCCGGAAG CCCGCTTCCT GGAGTTGGTT CACCGTTTGG ACCGCGATAC CTCGGGCGTA CTGCTGGTGG CGAAAAAGCG TTCTGCGCTG CGCTCCTTGC ATGAGCAACT GCGCTTGAAA GGGATGCAGA AGGATTATTT GGCACTGGTG CGCGGTGAGT GGCAGTCGCA TTGCAAAGCG GTGCAGGCAC CGTTGCTGAA AAACATTCTG CAGAGCGGTG AACGCATCGT GCGTGTCAGC AGCGAAGGCA AGCCGTCGGA AACCCGCTTC AAGGTGGAAG AGCGCTTTGA GCATGCGACG CTGGTCAAGG CCAGCCCGAT CACCGGGCGT ACTCACCAGA TCCGCGTTCA CGCGCTGCAC GCCGGGCATC CAATAGCCTT TGACGATCGT TATGGCGATC GTGAGTTCGA TCGCCAATTG GCGGGGACCG GGCTTAAACG TTTGTTCCTG CATGCAGCGG CGTTGCGTTT TGAACATCCG GGCACCGGCG AAACCATGCG TATCGAAGCC CCGATGGACG CAGAATTGCG CCACTGCCTG CAGGTATTGC GCAAGCAGTC CAAACAGCAG TAA
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Protein sequence | MKTNIPAVQL ITISDDEAGQ RIDNFLLARL KGVPKSMIYR IVRKGEVRVN KGRIKAEYKL APGDVVRVPP VRVAEREDAP VSAKLDKVAA LAHCILYEDD HLLLLNKPSG TAVHGGSGLS FGVIEALRAL RPEARFLELV HRLDRDTSGV LLVAKKRSAL RSLHEQLRLK GMQKDYLALV RGEWQSHCKA VQAPLLKNIL QSGERIVRVS SEGKPSETRF KVEERFEHAT LVKASPITGR THQIRVHALH AGHPIAFDDR YGDREFDRQL AGTGLKRLFL HAAALRFEHP GTGETMRIEA PMDAELRHCL QVLRKQSKQQ
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