Gene Spro_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1896 
Symbol 
ID5606386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2079142 
End bp2080188 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content56% 
IMG OID640937432 
Productdihydroorotase 
Protein accessionYP_001478127 
Protein GI157370138 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0418] Dihydroorotase 
TIGRFAM ID[TIGR00856] dihydroorotase, homodimeric type 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0828731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000136895 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGCAC AACCTCAAGC CCTAAAAATT CGCCGCCCTG ACGACTGGCA CATCCATCTG 
CGCGATGACG ACATGCTGAA AACGGTATTA CCTTATACCA GTCAGGTCTT TGGCCGGGCG
ATTGTGATGC CGAACCTGGC TCTGCCAATT ACTACCGTCG CCGCGGCTTG CGCTTATCGT
GACCGTATTC TGGCAGCGGT CCCTCAGGGA CATGATTTCA CCCCGCTGAT GACCTGCTAC
CTGACCAATT CACTGGATGC AGCCGAACTG GTCAACGGGT TTGAGCAAGG CGTGTTCACC
GCCGCCAAGC TGTACCCGGC CAATGCCACT ACCAATTCCA GCCACGGCGT CAGCGATGTG
AAAGCCATTT ACCCGCTGTT CGAGCAAATG CAGAAAATCG GCATGCCACT GTTGATTCAC
GGTGAAGTGA CCGATGCCGC CGTTGATATT TTCGATCGCG AGGCTCGCTT TATTGAGCAG
GTCATGGAGC CGATTCGTCA GCAGTTCCCT GAACTTAAAA TCGTCTTCGA ACACATCACC
ACCAAAGAAG CGGCGCAGTA CGTGCAGGAA GGCAATCGTT TCCTTGGCGC GACCATCACC
CCTCAGCACC TGATGTTTAA CCGCAACCAC ATGCTGGTTG GCGGTATCCG TCCGCACCTG
TTCTGCCTGC CAATCCTGAA ACGCAATATT CACCAGGACG CACTGCGCAA AGCCGTTGCC
AGCGGTTCGG ATCGCTTCTT CCTCGGCACC GACTCCGCAC CACATGCCAA ACACCGCAAG
GAATCCAGCT GCGGCTGCGC TGGCGTATTC AACGCTCCCA ATGCGATCCC GGCTTACGCC
AGCGTGTTCG AGCAACTCGG TGCGCTGGAT CATCTGGAAG CCTTCTGCTC ATTGAACGGC
CCGCGTTTTT ATGGCCTGCC GGTCAATACC GATTTCATCG AGCTGCAACG CGTAGCGACG
ACTCAGCCGG AAGAGATCGC CATGGGCAGC GAAACGGTCA TTCCATTCCT GGCCGGGGAG
AGTCTGAGCT GGTCGGTGAA AGCATAA
 
Protein sequence
MTAQPQALKI RRPDDWHIHL RDDDMLKTVL PYTSQVFGRA IVMPNLALPI TTVAAACAYR 
DRILAAVPQG HDFTPLMTCY LTNSLDAAEL VNGFEQGVFT AAKLYPANAT TNSSHGVSDV
KAIYPLFEQM QKIGMPLLIH GEVTDAAVDI FDREARFIEQ VMEPIRQQFP ELKIVFEHIT
TKEAAQYVQE GNRFLGATIT PQHLMFNRNH MLVGGIRPHL FCLPILKRNI HQDALRKAVA
SGSDRFFLGT DSAPHAKHRK ESSCGCAGVF NAPNAIPAYA SVFEQLGALD HLEAFCSLNG
PRFYGLPVNT DFIELQRVAT TQPEEIAMGS ETVIPFLAGE SLSWSVKA