Gene Spro_1891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1891 
Symbol 
ID5606320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2075842 
End bp2076468 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content50% 
IMG OID640937427 
ProductLuxR family transcriptional regulator 
Protein accessionYP_001478122 
Protein GI157370133 
COG category[K] Transcription 
COG ID[COG2771] DNA-binding HTH domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000479557 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACTGC TTGTCGTGGA CGAATGCTGC TTCACTCGGG TCGGGATCGA TAACTATTTT 
ACGGACAATG TTTTCGCCCA GATAAAATGT TGTCACAGCC TGGAACAGGC TACTCCCCTG
CTGGAGCACT ACCGACCCAG TCATATCCTG GTCAACCTGA CCAAACATTG CCGTCATAGT
GAAGATGATG CCCAACTGCA GGCTTTTATT GAAGCCACCC CATCGGCATT GCTGTTCATT
TACCTGGACA CCCCCTATCC CTATAGCGAA GCGCCAATGC GTATCGCCGA CCATGCTTTC
CTGTTCAATA AAGCCACGCT GCCGGTGACA TTACGCATGA TGCGGGAAAA ACCGGTGTCA
CTGATGGATT GCAGCGTTGA ACATTCGCTG TTCAGCCCGC AGGAACTGAC GGTAATGAAG
CACTGGATGG CGGAAATGCC CAATTACCGC ATCGCAAAAA AACTGCAAAT CAGCTCGCAC
ACCGTCTATG TTCACAAGCG GCATATCACA GAGAAAATCA ACGCCCGCAA CCGGCTGGAA
TTTTATTCGC TGTATAACGT GCTGCGTTAC TTCTATCCGC CAAGTGTTTC TGCCAGCCCA
ATGTCATTGT CCTTACTGGC GGTTTGA
 
Protein sequence
MKLLVVDECC FTRVGIDNYF TDNVFAQIKC CHSLEQATPL LEHYRPSHIL VNLTKHCRHS 
EDDAQLQAFI EATPSALLFI YLDTPYPYSE APMRIADHAF LFNKATLPVT LRMMREKPVS
LMDCSVEHSL FSPQELTVMK HWMAEMPNYR IAKKLQISSH TVYVHKRHIT EKINARNRLE
FYSLYNVLRY FYPPSVSASP MSLSLLAV