Gene Spro_1784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1784 
Symbol 
ID5605060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1959481 
End bp1961028 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content55% 
IMG OID640937316 
Producthypothetical protein 
Protein accessionYP_001478015 
Protein GI157370026 
COG category[S] Function unknown 
COG ID[COG3517] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03355] type VI secretion protein, EvpB/VC_A0108 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.170054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATGT CTGTAAAAAA TGAGAATACC GCTGGCGGTG AGAGCGTGGT GCTGGAGCGT 
CCGGAAGCGA GCGGTGTGTA TGCTTCCCTG TTTGAAAAAA TTAACTTAAG TCCGGTCTCC
GAGTTGAGTG CGCTGGATAT CTGGCAGGAT AACCAGGCGA TGTCCGATGC CACGGCTGAC
GAGCGTCTGA CTGCCGGGAT GCAGGTCTTT CTGGAATGCC TGACTAAATC GGGTTCAAAA
GTCGAGAAGC TGGACAGAAC CCTGATTGAC CACCACATCG CGGAGCTGGA TTATCAGATT
AGCCGCCAGT TGGACAGAGT CATGCACCAT GAGGCATTCC AGTCGGTAGA ATCCCTGTGG
CGCGGGGTGA AGTCACTGGT CGACAAAACC GACTTCCGTC AGAACGTCAA AATCGAGCTG
CTTGACCTGT CGAAGGACGA TTTGCGTCAG GATTTTGAAG ACGCGCCGGA AATCATTCAG
AGCGGACTGT ATAAACATAC CTATATCGAT GAGTACGACA CCCCGGGTGG CGAACCTATT
GGCGCACTGA TTTCTGCCTA CGAGTTTGAT GCCTCTGCGC AGGACGTGGC GCTGCTGCGC
AATATCTCCA AAGTCTCCGC TGCCGCTCAT ATGCCGTTTA TCGGATCGGC TGGCCCGAAA
TTCTTCCTCA AAGACAATAT GGAAGACGTG GCGGCGATTA AAGATATCGG CAACTACTTC
GATCGTGCCG AATACATCAA ATGGAAATCC TTCCGCGAGA CGGACGATTC CCGCTATATC
GGTCTGGTGA TGCCGCGTGT ACTGGGCCGC CTGCCGTACG GTCCGGACAC CGTGCCGGTG
CGCAGCTTCA ACTACGTCGA AGAAGTGAAA GGCCCGGATC ACGACAAATA TCTGTGGACC
AACGCCTCCT TTGCGTTTGC CGCCAACATG GTGCGCAGCT TCATCAACAA CGGCTGGTGT
GTACAAATCC GTGGCCCGCA GGCCGGTGGT GCCGTTCAGG ACCTGCCTAT CCATTTGTAC
GATCTGGGCA CCGGCAATCA GGTGAAGATC CCGAGTGAGG TGATGATCCC GGAAACTCGC
GAGTTTGAAT TCGCCAACCT GGGCTTTATC CCGCTGTCGT ACTACAAGAA TCGTGATTAT
TCCTGTTTCT TCTCCGCCAA CTCCACCCAG AAACCGGCGC TGTATGACAC CGCCGATGCG
ACGGCCAACA GCCGCATCAA CGCCCGTCTG CCGTACATCT TCCTGCTGTC ACGCATTGCG
CATTACCTGA AGCTTATTCA GCGTGAAAAC ATCGGTACCA CCAAGGATCG TCGTCTGCTG
GAGCTGGAAC TCAATACCTG GGTGCGCAGC CTGGTAACAG AAATGACCGA TCCGGGCGAC
GACCTGCAGG CGTCTCACCC GCTGCGTGAT GCGAAAGTGA CGGTGGAAGA TATCGAAGAT
AACCCGGGCT TCTTCCGCGT GAAGTTGTAT GCCGTACCGC ATTTCCAGGT GGAAGGCATG
GACGTGAATC TGTCGCTGGT TTCCCAGATG CCGAAAGCAA AAGCCTAA
 
Protein sequence
MLMSVKNENT AGGESVVLER PEASGVYASL FEKINLSPVS ELSALDIWQD NQAMSDATAD 
ERLTAGMQVF LECLTKSGSK VEKLDRTLID HHIAELDYQI SRQLDRVMHH EAFQSVESLW
RGVKSLVDKT DFRQNVKIEL LDLSKDDLRQ DFEDAPEIIQ SGLYKHTYID EYDTPGGEPI
GALISAYEFD ASAQDVALLR NISKVSAAAH MPFIGSAGPK FFLKDNMEDV AAIKDIGNYF
DRAEYIKWKS FRETDDSRYI GLVMPRVLGR LPYGPDTVPV RSFNYVEEVK GPDHDKYLWT
NASFAFAANM VRSFINNGWC VQIRGPQAGG AVQDLPIHLY DLGTGNQVKI PSEVMIPETR
EFEFANLGFI PLSYYKNRDY SCFFSANSTQ KPALYDTADA TANSRINARL PYIFLLSRIA
HYLKLIQREN IGTTKDRRLL ELELNTWVRS LVTEMTDPGD DLQASHPLRD AKVTVEDIED
NPGFFRVKLY AVPHFQVEGM DVNLSLVSQM PKAKA