Gene Spro_1697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1697 
Symbol 
ID5604250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1857693 
End bp1858388 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content54% 
IMG OID640937229 
ProductHAD family hydrolase 
Protein accessionYP_001477929 
Protein GI157369940 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0993915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTG AACTCAGAGT CATTATGTTT GACCTTGACG GCACCCTGTT TGATACGGCG 
AGAGCGATAG TCTCTGCCTT TCGTGCCACC TTTCAACAAC TGCAATTACC ACAGCCGGCC
GAGGATGAGC TGATTCGTGA AACGATAGGC CTGCCGTTGG AGCGTGCCTT TGCCCAATTG
CTGTCTCAGG AGGCCGATAG CCGGACAGTA ACCGACTGCG TGGCGGAGTA TCAACGGCAG
TTTCAGACGC TGATTTTACC CATGGCGGCA TCGCTGTTAT TTCCTGGCGT CGCTGCGGGC
CTGCAACAGT TGAAAGGAGC GGGTTTTCAT CTGGCGGTGA CCACTAATAA GTTCGCACGC
AGTGCAAATT CGCTATTGGC GGCGGCGGGC ATTGCCCCAT TGTTTGATGT GGTGGTTTGC
GCTGACCAGG TAACGGAGAA AAAACCGGCG CCGGAGTCTG GCAACAAAAT CCTGGATCAC
TATCAGGTCA GGGCGATCGA TGCGGTGATG GTGGGGGATA CTACGCACGA CATATTGATG
GCTCATCAGG TTGGCTGTCA GGTGATCGCG GTGGATTATG GTATTCAAAA TCGTCAGGTA
CTGGCCGCGG CCGAGCCCAG CATTATTGTA AGCTCTTTTG CCGCCGTGGT TGACTGGTGC
CGTCACAGAG ACGTTAGTCG CGTAGCAGCA GGCTAG
 
Protein sequence
MKSELRVIMF DLDGTLFDTA RAIVSAFRAT FQQLQLPQPA EDELIRETIG LPLERAFAQL 
LSQEADSRTV TDCVAEYQRQ FQTLILPMAA SLLFPGVAAG LQQLKGAGFH LAVTTNKFAR
SANSLLAAAG IAPLFDVVVC ADQVTEKKPA PESGNKILDH YQVRAIDAVM VGDTTHDILM
AHQVGCQVIA VDYGIQNRQV LAAAEPSIIV SSFAAVVDWC RHRDVSRVAA G