Gene Spro_1638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1638 
Symbol 
ID5604015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1794609 
End bp1795577 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content53% 
IMG OID640937170 
Productpyridoxal-5'-phosphate-dependent protein beta subunit 
Protein accessionYP_001477870 
Protein GI157369881 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00191621 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAAAAT TAATTGAATT TACCGCCATT ACTGAAGCAG CAGAACGGCT CAATGGGAAA 
GTTATTCGCA CCGCCACTAT TCCAGCACCG AAACTGACTG AAAAACTACA GAGGCCGGTT
TTCCTGAAAC TTGAAAATAC TCAGTTGGGG GGCTCTTTTA AAGCCAGGGG CGTGCTTAAC
AAATTTTTGA GCCTGGCGGA CGATGTTAAA GATAAACGGT TTGTGGCGGT GAGCGGCGGT
AATTTTGGCA TTGCGATAGC CGAGGCGGCG AAGATCTTTG GGGCTGATGT CACTATTATT
ATGCCGCAAA GTGCCCCGGC AACCGCCATC GACCGGGTGG GTGAACTGGG CAGCTCTGTT
ATCGTGGAAT CTGATGTTCA CGCTGCGTTT GAGCGGGCCA AGGCCTTGGC TGACCAGGGA
TACGTAGTCA TTGATGATTG CAACGACTCG CTGATTGCTG AAGGACACGG AACCCTGGCA
CTTGAGTTCA TTGCCGATTG CCCGGAACTT ACCGACGTCC TGGTTGCGGT GGGCGGCGGC
GGTATGCTGG CTGGTGTGGC TACTGCGCTA AAAGCCATAA GGCCAGAGAT GAGAATTTGG
GGGGTTGAAA CCTCTGGGGC AAGTTCGATG CACCAGGCAT TGCGCGCCGG CAAACCGGTG
AACATTGAGG TGACTTCAAT TATCTCTACC CTCGGCGTGC CTGTCATTGA TGAAATGATG
CTGGCCCATG CTCAAGCTTA TATCGAGGAA GTGGTTGTGG TATCGGATAA GGCAGCGGTA
GAGGGAATGG TGGCCTTTGG CGAAGATGCA AAATTATGGG TTGAACTGGC GTCCGGGACG
CTGATACCTG CGGCTATGGT CATTGCCCCC AAGCTTCCCG CTAACGCCGT CATTGGGATG
GTAGTGTGCG GTGGAAATAT CTCCCATCAG GACATGTCGA AATGGGTTAG CTACTCGCAA
ACCCTGTGA
 
Protein sequence
MTKLIEFTAI TEAAERLNGK VIRTATIPAP KLTEKLQRPV FLKLENTQLG GSFKARGVLN 
KFLSLADDVK DKRFVAVSGG NFGIAIAEAA KIFGADVTII MPQSAPATAI DRVGELGSSV
IVESDVHAAF ERAKALADQG YVVIDDCNDS LIAEGHGTLA LEFIADCPEL TDVLVAVGGG
GMLAGVATAL KAIRPEMRIW GVETSGASSM HQALRAGKPV NIEVTSIIST LGVPVIDEMM
LAHAQAYIEE VVVVSDKAAV EGMVAFGEDA KLWVELASGT LIPAAMVIAP KLPANAVIGM
VVCGGNISHQ DMSKWVSYSQ TL