Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1583 |
Symbol | |
ID | 5603123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 1727572 |
End bp | 1728708 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640937115 |
Product | polysaccharide export protein |
Protein accession | YP_001477815 |
Protein GI | 157369826 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.323182 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.546592 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAA AACAATGGAA ACTGATACCG ATTTTGGTAT CGATTAGTGT GATCAGTGGT TGTACAATCA TCCCCGGTAC CCACCTTTCC ACTAGTGGTA AAGATATTGT AAAACAAGAA GATAGCGATT TTGATATTGA TAAACTGGTA AACGTCTATC CAATGACACC AGGATTGATT AGCAAAATGA GGCCAAAGCC TGCGATAGCG CAACCGAATA GTGCATTGGA ACGTGAATTG CAGAATTATG AGTATCGCAT TGGTGTAGGT GACGTTTTAA TGGTGACCGT TTGGGATCAT CCAGAATTAA CTACCCCAGC TGGTCAATAC CGTAGCGCCA GCGATACTGG TAACTGGGTG AATTCTGATG GAACCATATT CTATCCTTAT ATCGGCAAGG TAAAAGTTGT TGGTAAAACT GTTGTCCAAG TTAGAAATGA AATCTCATCG CGTTTATCTC ACTATATAGA AAGTCCTCAG GTTGATGTGA GTATTGCAGC ATTCCGGTCA CAGAAAACGT ATATCACAGG AGAGGTTTCT AAATCCGGTC AGCAAGCTAT TACCAACGTG CCGTTAACTG TGATGGATGC TATCAACGCC GCAGGCGGTT TGGCAGAAAA TGCTGATTGG CGTAATGTTG TATTAACTCA TAATGGTAAA GAGCAGCGTA TTTCTCTACA GGCGTTAATG CAAAAAGGCG ATTTGACACA AAACCATCTT CTTTATCCAG GCGATATTCT TTACGTACCA CGTAATGATG ATTTGAAAGT GTTTGTCATG GGTGAAGTTA AAACTCCTGC GACACTAAAA ATGGATAGAA GCGGGATGAC TTTGACTGAA GCTTTGGGAA ATTCGGAAGG CATCAGCCAA TCCACCGCAG ATGCGACTGG TGTTTTTGTT ATTCGCCCAT TACATGGTAC TGAAGGTAAC AAGCTTGCCA ATATTTACCA ATTAAACATG GCAGATGCGA CTGCGATGGT TATGGGGGCT GAGTTCCATT TGCAGCCATA TGATATTGTG TATGTGACGG CAGCTCCCGT TGCCCGCTGG AATCGTTTGA TCAGTCAGTT AGCTCCGACT ATTTCTAGCT ATAATGATCT CAGTGAAGGT ACGTTACGAA TTCGTAATTG GCCGTAG
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Protein sequence | MAKKQWKLIP ILVSISVISG CTIIPGTHLS TSGKDIVKQE DSDFDIDKLV NVYPMTPGLI SKMRPKPAIA QPNSALEREL QNYEYRIGVG DVLMVTVWDH PELTTPAGQY RSASDTGNWV NSDGTIFYPY IGKVKVVGKT VVQVRNEISS RLSHYIESPQ VDVSIAAFRS QKTYITGEVS KSGQQAITNV PLTVMDAINA AGGLAENADW RNVVLTHNGK EQRISLQALM QKGDLTQNHL LYPGDILYVP RNDDLKVFVM GEVKTPATLK MDRSGMTLTE ALGNSEGISQ STADATGVFV IRPLHGTEGN KLANIYQLNM ADATAMVMGA EFHLQPYDIV YVTAAPVARW NRLISQLAPT ISSYNDLSEG TLRIRNWP
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