Gene Spro_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1576 
Symbol 
ID5602922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand+ 
Start bp1718381 
End bp1719022 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content48% 
IMG OID640937108 
Producturidine kinase 
Protein accessionYP_001477808 
Protein GI157369819 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID[TIGR00235] uridine kinase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.435743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACA AGCCGCATCA GTGCGTCATT ATTGGTATAG CTGGCGCATC TGCCTCCGGA 
AAAAGCCTTA TCGCCAGTAC GTTGTATCGT GAACTTCGCG ATCAGGTTGG CGATGAACAT 
ATCGGCGTTA TTCCTGAAGA CAGTTACTAC AAAGACCAGA CTCACTTGAC CATGGAAGAA 
AGGGTCAAGA CAAACTATGA CCACCCAAGC GCCATGGACC ACAACCTGCT GTTTCAGCAT 
CTGCAGATGC TGAAATCAGG CAAGGCGATA GAGTTACCCT TGTACAGTTA CACCGAGCAC 
ACGCGTAAGA AAGAGACTAT TCACCTTGAA CCGAAAAAGG TGATTATTCT TGAGGGGATC 
CTGCTGTTGA CGGATATCCG TCTGCGTCAG GAAATGAATT TCTCGATCTT TGTTGATACG 
CCGCTGGATA TTTGCCTGAT GCGCCGTATG AAGCGTGATG TGAATGAACG TGGTCGCTCG 
ATGGATTCGG TAATGGCGCA ATATCAGAAA ACCGTCCGCC CGATGTTCCT GCAGTTTATC 
GATCCTTCCA AACAATACGC CGACATTATC GTCCCACGCG GGGGTAAAAA CCGCATTGCG 
ATCGATATTC TGAAAGCCAA AATCAGCCAG TTCTTTGAGT AA
 
Protein sequence
MTDKPHQCVI IGIAGASASG KSLIASTLYR ELRDQVGDEH IGVIPEDSYY KDQTHLTMEE 
RVKTNYDHPS AMDHNLLFQH LQMLKSGKAI ELPLYSYTEH TRKKETIHLE PKKVIILEGI 
LLLTDIRLRQ EMNFSIFVDT PLDICLMRRM KRDVNERGRS MDSVMAQYQK TVRPMFLQFI 
DPSKQYADII VPRGGKNRIA IDILKAKISQ FFE