Gene Spro_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1556 
Symbol 
ID5602628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1695390 
End bp1696232 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content59% 
IMG OID640937088 
ProductS-formylglutathione hydrolase 
Protein accessionYP_001477788 
Protein GI157369799 
COG category[R] General function prediction only 
COG ID[COG0627] Predicted esterase 
TIGRFAM ID[TIGR02821] S-formylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTGT CATTAGAACT TCTCGAAGAG CACCGTATGT TCGGCGGCTG GCAACAGCGT 
TATCGCCATG CGGCGCAGAG CCTGAATTGC AACATGACTT TCAGCATCTA TCTGCCGCCC
CCGCGCGATG ATAACCCGCC GCCAGTGCTG TACTGGCTGT CGGGGCTGAC CTGCAATGAT
GAAAACTTCA CGCTGAAGGC CGGCGCGCAG CGTGTCGCCG CCGAGCTGGG GTTGGTGCTG
GTGATGGCCG ATACCAGCCC GCGTGGCGAC GATGTGCCCA ATGATGAAGG CTACGATTTG
GGCCAGGGTG CCGGTTTTTA TTTGAACGCC ACCCAGGCGC CGTGGGACAA GCACTTTCGC
ATGTATGATT ACATCAGTGA CGAGCTGCCG GCGCTGATTA ATCAGCATTT CAGCGTCAGC
GATCGCCAGT CGATCTTCGG TCACTCAATG GGTGGCCACG GCGCACTGGT AATGGCGTTT
CGCAATCCGC AGCGTTTCCG TTCAGTGTCG GCCTTTGCGC CCATCGTTAA CCCCTGTCAG
GTTCCATGGG GACGTAAAGC CTTTGCCACC TATTTGGGCA ATGATGAAAG CCAGTGGCTG
CAGTATGACA GTTGCCACCT GCTGGCCAAC GGCGCGGAAA AAATGCCGGT GCTGGTGGAT
CAGGGTGACG ACGATCAGTT CCTGGCGGAT CAACTGCAAC CGGCGAAGCT GGCCGAACTG
GCGCGCCAGC GCGACTGGCC GCTAACCCTG CGCATCCAGC CGGGCTACGA CCACAGCTAC
TTCACCATCG CCAGCTTTAT CGAAGACCAC CTGCGCTTCC ACGCCGAACA TCTGTTCCGC
TGA
 
Protein sequence
MTLSLELLEE HRMFGGWQQR YRHAAQSLNC NMTFSIYLPP PRDDNPPPVL YWLSGLTCND 
ENFTLKAGAQ RVAAELGLVL VMADTSPRGD DVPNDEGYDL GQGAGFYLNA TQAPWDKHFR
MYDYISDELP ALINQHFSVS DRQSIFGHSM GGHGALVMAF RNPQRFRSVS AFAPIVNPCQ
VPWGRKAFAT YLGNDESQWL QYDSCHLLAN GAEKMPVLVD QGDDDQFLAD QLQPAKLAEL
ARQRDWPLTL RIQPGYDHSY FTIASFIEDH LRFHAEHLFR