Gene Spro_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1552 
Symbol 
ID5602586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1692364 
End bp1693284 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content59% 
IMG OID640937084 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001477784 
Protein GI157369795 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAATT ATTTTCTGAA ACGGCTGCTG GGCCTGATCC CGACGCTGCT GATTGTCGCG 
GTGCTGGTGT TTTTGTTTGT CCATCTGCTG CCCGGCGATC CGGCACGGTT GGCGGCGGGG
CCGGAGGCCG ACGAGGCGGT AGTGCAACTG GTGCGTAAGG ATCTGGGGCT CGACAAGCCG
CTACCGCAGC AGTTTGTGCA TTTTTTTGTC AATGCTCTGC GGGGGGATTT TGGCACCTCG
ATGGTCTCCA AACGGCCGGT AAGCGAAGAG ATTGGCTCGC GCTTTCTGCC GACCCTGTGG
CTGACGCTGA CCAGCATGCT GTGGGCGACA TTCTTCGGTA TGGGCATCGG CATGCTGTCT
GCCGTTTGGC GTAACCGCTG GCCGGATCGC ATTGGTATGG CGCTGGCGGT CTCCGGCATT
TCATTCCCCG CTTTTGCGCT GGGTATGCTG CTGATGCAGG TGTTCTCGGT CAATCTGGGC
TGGTTACCGA CGGTGGGCGC CGACAGCTGG CGGCATTATA TTTTGCCCTC CATCACGCTG
GGGGCGGCGG TTGCAGCGGT GATGGCGCGT TTTACCCGCG CCTCGTTCGT TGAGGTGCTG
CAGGAAGACT ATATGCGCAC CGCGCGAGCC AAGGGCGTGC CGGAAACCCT GGTGGTGGTG
AAGCATGGCC TGCGCAATGC GATGATCCCG GTGGTCACCA TGATGGGGCT ACAGTTCGGC
TTTTTGCTCG GCGGCTCGAT CGTGGTGGAA AAGGTCTTCA ACTGGCCAGG GCTGGGCAGG
CTGCTGGTCG ACTCGGTGGA GATGCGCGAC TATCCGGTGA TCCAGGCCGA GGTTTTGCTG
TTCTCGCTAG AGTTTATTCT GATTAACCTG TTGGTGGACC TGCTGTATGC GGCAATTAAC
CCGGCGATAC GCTACAAATG A
 
Protein sequence
MLNYFLKRLL GLIPTLLIVA VLVFLFVHLL PGDPARLAAG PEADEAVVQL VRKDLGLDKP 
LPQQFVHFFV NALRGDFGTS MVSKRPVSEE IGSRFLPTLW LTLTSMLWAT FFGMGIGMLS
AVWRNRWPDR IGMALAVSGI SFPAFALGML LMQVFSVNLG WLPTVGADSW RHYILPSITL
GAAVAAVMAR FTRASFVEVL QEDYMRTARA KGVPETLVVV KHGLRNAMIP VVTMMGLQFG
FLLGGSIVVE KVFNWPGLGR LLVDSVEMRD YPVIQAEVLL FSLEFILINL LVDLLYAAIN
PAIRYK