| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1521 |
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| Symbol | |
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| ID | 5606541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 1657833 |
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| End bp | 1660448 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640937053 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_001477753 |
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| Protein GI | 157369764 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.911092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACATA AAAGAATAAC AACCCTCACG CCAAAACGTT TGGTCAGGCT GATTAATGGT
GTAATTTATT TTTCTGCGGT GCCATTTTCA TTCTCTCATA TGGCCATGGC GGAGGAGCAG
TTCAACACCT CCTTCATCCA TGGCGACGAC AACATTGCCC AGGTGGCAGC GTTGTCCAGC
GGCGATGATA TCTTGCCAGG CAAATATCCG TTTGATATTT ACCTGAATGG TCAGCGTATC
GATCACCGCG AAATCGAATT CAAAAAAGAT ACCAAAGACA CGCCGGTAAT GCCTTGCCTG
ACAGCGCAGG ATTACCAGGA CTACGGCGTT AAACTGCCAG GCGATATGAA AACCGAAGGT
GCCGCGCAGT GTTATGCGCT GTCACAGCAA ATCTCGGGTG CCAAGCTGAG CTATGACGCC
GCTATACAGC GTATGGATCT GGAAGTGCCG CAGGTGTTTC TGGAACCGCG TCCGCAAGGG
GCTATTTCGC CGAAGGTTTA CGATCGCGGG ATTAACGCCG GCTTCGTTAA CTATAACTTC
AGCGGCAACC ACAATAATTA CAGCAATAAC GCCAACGATA AAACATCAGA CTATTACTTC
CTGAGCCTGA ACAACGGTCT CAACATTGGT AATTGGCGTT TGCGCAATAA TTCGACGCTG
AACCAGCAGT CGGGTGCCGG TACTCATTGG AATACCGTTT CGAGCTGGGC AGAAACTGAC
ATTGTTTCCC TGCGTAGCCG CATGGTGATT GGCCAGACCA ACACCAACAA CAACGTGTTC
GACAGCATCC AGTTCCGCGG CGTGCAGATT TCCAGCGCCA ACGACATGCT GCCGGAAAGC
CAGCGCGGCT ATGCGCCGGT AGTGCGTGGC GTGGCGTCGA CCAACGCCCG CGTCGAGATC
CGCCAAAACG GCTACACCAT ATACAGCACC AACGTGCCGC CTGGCCCGTT TGCGCTGACG
GATATTTTCC CAAGTACCCT GAGCGGTAAC CTGAACGTAA CGGTCATTGA GGCCAACGGT
TCGAGAACCA CTTTCGTGGT GCCATTCTCT TCCGTGCCGA ACATGCTGCG TGAAGGGATC
TGGGACTATC AGATGACTGC CGGTAAGTAT CATGACGGCA CGACCAAATA CCAGCCAAAA
TTTGTGCAAG GCACCTTGTC CCACGGTATG GGGTATGACA TTACGCCTTA CGGCGGCGTG
CTGGTGGCAG AAAATTACCG TTCTGCGGTG CTGGGTATGG GTAAAAACAT GGGTGTTTGG
GGGGCGGTTT CTTTTGACAT GTCCTATTCC GACACCAACC TGGTCAACGG TGATGACAAG
CAGGGTGAGA GCTTCCGCTT CCTGTACTCC AAGTCGCTCA ACGACTGGGG TACTGAATTC
CAGATCGCCG GTTACCGTTA TTCGACCTCC GGCTACTATG ATTTCTCAGA TGCGGTTGCG
GAACGCGATC GCTATGAAAA CGGCTACTAC CGCAATGATT ACTACGATGA AAATGACCGT
AATCAGGGTG TACCTGACTG GGCTGAATCA CGTCGTCGGA CTTATTACAC CAGCAAGTTC
AACAATAAAC GCCAGCGTGT AGAATTGTCG ATCAATCAGC GTATCGCCGG TAACTCAACG
CTGTATACCA ACGTCAGCAA CCAGTCATAC TGGGGCGGCT CTGGCCAGGA TCGTACGGTT
CAAACCGGCT TTAACAGCAG CTATAAAAAC ATCAGCTACG GCGTGTTCTA TCAAGACAGC
CGCAGCAACT ACGGTTATAA AGATCGCAGT ATTAACATGA CTGTATCTAT TCCGTTCAGC
TTCTTCAGCA GAGACTCCTC TGATATGACG GCCAGCTTCA ACGCCGGGCA CAGCAAGCAG
AGCGGTAATA CCTATAGCGC CGGCCTGAGC GGTACCGCAT TGGACGATAA CCGTCTGAAC
TACGCGGTGC AGAGCGGTCA CGATCGTTAC GCTGGGCAAA CCACCTCGGC TAACGTGGGT
TATCAGGGCA GCATGGGTAC GGTGAATGCC GGTTACAGCT ACAGCAATGA TTACCAGCAG
TCTTCGTTGG GCGTATCGGG CGGTATCGTG GCGCACTCCG GTGGTGTGAC GTTGACTCAG
CCATTACAGA ACACTTTCGT GCTGGTTGAA GCCAAAGACG CCAAAGGCGT TCGTCTGGAA
AACCAACCGG GTGTGGCTAT TGACCGCTTT GGTTACGCGG TGATGACTTC TGCGTCGCCA
TACCGTCACA ACCGTGTGGC GCTGCGTACC GAAGATATCG GCAACGGCCT GGATATCCCG
ATGGCAGCTC GTGATGTGGT ACCGACATAC GGCGCAATTA CCCGCGTGAA GTTTGAAACG
CATACCGGTC AAAGCCTGCT GGTACACAGT AAAATGTTGG ACGGCGGCGT ACCGCCAATC
GGCGCCAACG TGTTCAGCGC TGACGGCAAG AACAACGGTA CCGTAGGTAC CAATGGGGAT
ATTTATATCT CCGGGGCATC CGCAGGGGAT CGCCTGTTGG TTAAATGGGG CAGCGATGCC
GGCGACAGCT GTTCATTAGT GGTGCCGGAA CTGAAATCGG CGACCGAACA GCTGATGGGC
TATCAGGAAC TTTCGCTGAC CTGCGGAAAA CCGTAA
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| Protein sequence | MAHKRITTLT PKRLVRLING VIYFSAVPFS FSHMAMAEEQ FNTSFIHGDD NIAQVAALSS
GDDILPGKYP FDIYLNGQRI DHREIEFKKD TKDTPVMPCL TAQDYQDYGV KLPGDMKTEG
AAQCYALSQQ ISGAKLSYDA AIQRMDLEVP QVFLEPRPQG AISPKVYDRG INAGFVNYNF
SGNHNNYSNN ANDKTSDYYF LSLNNGLNIG NWRLRNNSTL NQQSGAGTHW NTVSSWAETD
IVSLRSRMVI GQTNTNNNVF DSIQFRGVQI SSANDMLPES QRGYAPVVRG VASTNARVEI
RQNGYTIYST NVPPGPFALT DIFPSTLSGN LNVTVIEANG SRTTFVVPFS SVPNMLREGI
WDYQMTAGKY HDGTTKYQPK FVQGTLSHGM GYDITPYGGV LVAENYRSAV LGMGKNMGVW
GAVSFDMSYS DTNLVNGDDK QGESFRFLYS KSLNDWGTEF QIAGYRYSTS GYYDFSDAVA
ERDRYENGYY RNDYYDENDR NQGVPDWAES RRRTYYTSKF NNKRQRVELS INQRIAGNST
LYTNVSNQSY WGGSGQDRTV QTGFNSSYKN ISYGVFYQDS RSNYGYKDRS INMTVSIPFS
FFSRDSSDMT ASFNAGHSKQ SGNTYSAGLS GTALDDNRLN YAVQSGHDRY AGQTTSANVG
YQGSMGTVNA GYSYSNDYQQ SSLGVSGGIV AHSGGVTLTQ PLQNTFVLVE AKDAKGVRLE
NQPGVAIDRF GYAVMTSASP YRHNRVALRT EDIGNGLDIP MAARDVVPTY GAITRVKFET
HTGQSLLVHS KMLDGGVPPI GANVFSADGK NNGTVGTNGD IYISGASAGD RLLVKWGSDA
GDSCSLVVPE LKSATEQLMG YQELSLTCGK P
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