| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1512 |
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| Symbol | |
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| ID | 5602802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 1646501 |
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| End bp | 1648540 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640937044 |
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| Product | choline transport protein BetT |
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| Protein accession | YP_001477744 |
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| Protein GI | 157369755 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0971262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAC GCGAAACCTC CTCAAAACCG CAAAAGGATG GCCTTAATCC TGTGGTTTTC
TTTACCTCGG CAGGGCTGAT TTTGGCCTTC TCGCTGATGA CCATCTTTTT TACCGATTTC
TCCGGGCGAT GGATCACCCG CACCCTGAAT TGGGTTTCAA CCACCTTCGG CTGGTACTAT
CTGCTGGCCG CCACCCTGTA CATCGTATTT GTGGTGTTTA TCGCCGCTTC GCGCTTTGGT
TCTATCAAGC TCGGGCCTGA ACAATCAAAA CCCGAATTCA GCCTGATGAG CTGGGCGGCG
ATGCTGTTCG CCGCCGGTAT CGGCATCGAT CTGATGTTCT TCTCGGTCGC CGAACCGGTG
ACACAATATA TGATGCCGCC GGAAGGCCAG GGCCAGACGC TGGAAGCCGC ACGCCAGGCA
ATGGTCTGGA CGCTGTTCCA CTACGGCCTG ACCGGCTGGT CGATGTATGC GTTGATGGGT
ATCGCCCTCG GCTATTTCAG CTACCGCTAT AACCTGCCGC TGACCATCCG CTCTGCCCTG
TACCCGATTT TCGGTAAACG CATCAATGGC CCGATTGGCC ACAGCGTAGA TATCGCCGCG
GTGCTGGGTA CCATCTTCGG TATCGCCACC ACGCTCGGTA TTGGCGTAGT GCAGTTGAAC
TACGGGCTGA AAGTGCTGTT CCACATACCG GAAAACCTGA CGGTTCAGGC CGCGTTGATC
CTGCTTTCGG TGATCATGGC CACCATTTCG GTGACTTCCG GCGTCAATAA GGGCATCCGT
ATTCTGTCCG AGCTCAACGT GCTGTTGGCA CTGGGGCTGA TTTTATTCGT GCTGTTCTTC
GGCGATACCG AGTTCCTGCT CAATGCGCTG GTGCTTAACG TCGGTGATTA CGTCAACCGC
TTTATGGGCA TGACGCTCAA CAGCTTCGCC TTCGATCGCC CGGTGGAATG GATGAACAAC
TGGACCCTGT TCTTCTGGGC ATGGTGGGTG GCCTGGGCGC CGTTTGTCGG CCTGTTCCTG
GCGCGAATTT CACGTGGGCG CACCATTCGC CAGTTTGTGG TCGGCACGCT GATTATTCCG
TTCGTGTTTA CCCTGCTGTG GTTGTCAATC TTCGGTAACA GCGCGCTGTA CCAGATTATT
CACGGCAACG CCGCCTTCGC GCAGGAAGTG ATGCAGTACC CGGAACGGGG GTTCTACAGC
CTGCTGGCGC AGTATCCGGG CTTTACCTTC AGCGCTTCGG TGGCCACTAT CACTGGGCTG
CTGTTCTACG TCACCTCAGC GGATTCAGGC TCGCTGGTGC TGGGTAACTT CACCTCACGC
CTGAGTGATA TCAATAATGA CGCCCCCAAC TGGCTGCGTA TTTTCTGGTC GGTGGCGATT
GGTCTGCTGA CCATAGGTAT GTTGATGACC GACGGCGTGC CTGCCCTGCA GAAAACCACG
GTGATCATGG GCCTGCCGTT CAGTTTTGTG ATCTTCTTCG TGATGGCCGG GTTGTATAAA
TCGCTACGGG TGGAGGACTA CCGCAAGGCC AGCGCGCTGA ACACCAATGC GCCCATGCCG
GTGTCCAGCA ATGACGTGCT GAACTGGAAA CAGCGCCTGT CGCGGGTAAT GAATTATCCG
GGCAGCCAAT ATACACAGAA AATGATGGAT ACCCGCTGTC GGCCGGCGAT GCAGGAAGTG
GCGCGTGAGC TGGAATTACG CGGCGCCAAA GTGGAGTTCA GTGAAGTGCC GCCAACCGAA
GATGAGCGTT TAAACCATCT GGAGTTGCTG GTGCATTTAG GCGAGGAGCA GAACTTTATC
TATCAGATCT GGCCGCAGCG TTACTCGGTG CCGGGCTTTA CCTATCGCGC CCGCTCCGGC
AAGTCGCACT ACTACCGGCT GGAAACCTTC CTGATGGAAG GCACCCAGGG CAATGACCTG
ATGGACTACA GCAAGGAACA GGTGATCGGC GATATCCTCG ATCAGTACGA AAAACACCTG
AACTTTGTGC ACATCCACCG CGAGGCACCG GGTAACACCC TGACCTTCCC GGATATGTAA
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| Protein sequence | MTTRETSSKP QKDGLNPVVF FTSAGLILAF SLMTIFFTDF SGRWITRTLN WVSTTFGWYY
LLAATLYIVF VVFIAASRFG SIKLGPEQSK PEFSLMSWAA MLFAAGIGID LMFFSVAEPV
TQYMMPPEGQ GQTLEAARQA MVWTLFHYGL TGWSMYALMG IALGYFSYRY NLPLTIRSAL
YPIFGKRING PIGHSVDIAA VLGTIFGIAT TLGIGVVQLN YGLKVLFHIP ENLTVQAALI
LLSVIMATIS VTSGVNKGIR ILSELNVLLA LGLILFVLFF GDTEFLLNAL VLNVGDYVNR
FMGMTLNSFA FDRPVEWMNN WTLFFWAWWV AWAPFVGLFL ARISRGRTIR QFVVGTLIIP
FVFTLLWLSI FGNSALYQII HGNAAFAQEV MQYPERGFYS LLAQYPGFTF SASVATITGL
LFYVTSADSG SLVLGNFTSR LSDINNDAPN WLRIFWSVAI GLLTIGMLMT DGVPALQKTT
VIMGLPFSFV IFFVMAGLYK SLRVEDYRKA SALNTNAPMP VSSNDVLNWK QRLSRVMNYP
GSQYTQKMMD TRCRPAMQEV ARELELRGAK VEFSEVPPTE DERLNHLELL VHLGEEQNFI
YQIWPQRYSV PGFTYRARSG KSHYYRLETF LMEGTQGNDL MDYSKEQVIG DILDQYEKHL
NFVHIHREAP GNTLTFPDM
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