| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1484 |
|---|
| Symbol | ompX |
|---|
| ID | 5607403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 1619163 |
|---|
| End bp | 1619681 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640937016 |
|---|
| Product | outer membrane protein X |
|---|
| Protein accession | YP_001477716 |
|---|
| Protein GI | 157369727 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3637] Opacity protein and related surface antigens |
|---|
| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTGCATGTCT TTCCGCAGTA GCAGCCTGTG TATTAGCAGT AACCGCAGGT
ACCGCATTCG CTGGCCAGAG CACCGTATCC GCAGGCTATG CGCAGGGTGA TCTCCAAGGC
GTTGCCAACA AAGCCGACGG TTTCAACCTG AAGTACCGTT ACGAGTTCGA CAACAACCCA
CTGGGTGTGA TCGGTTCCTT TACCCACGTG GAAAAGAACG GTTCTGAGAA CGGTTACTAC
GGTAAAGCTC AGTACAACTC TATCACTGCT GGTCCAGCTT ACCGCTTCAA CGACTGGGCA
AGCATCTACG GTGTAGTTGG TGTTGGCTAC GGCAAAAACA TCGACAACGC CCAAAACGGT
TCTGACCGTA ACGGCAGCAG CGACTACGGC TTCACCTACG GTGCTGGCCT GCAGTTCAAC
CCAATCCAGG ACGTAGCTCT GGACGTGGGT TACGAGCAGA GCCGTATCCG CAGCGTTGAC
GTTGGCATCT GGAGCGTTGG CGTAGGCTAC CGTTTCTAA
|
|---|
| Protein sequence | MKKIACLSAV AACVLAVTAG TAFAGQSTVS AGYAQGDLQG VANKADGFNL KYRYEFDNNP
LGVIGSFTHV EKNGSENGYY GKAQYNSITA GPAYRFNDWA SIYGVVGVGY GKNIDNAQNG
SDRNGSSDYG FTYGAGLQFN PIQDVALDVG YEQSRIRSVD VGIWSVGVGY RF
|
|---|
| |