Gene Spro_1350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1350 
Symbol 
ID5605820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1480964 
End bp1481527 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content58% 
IMG OID640936882 
ProductSNARE associated Golgi protein 
Protein accessionYP_001477582 
Protein GI157369593 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00752365 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATT TGGCCCACTA CATTACGGAT TACGGCTACT GGGCGCTGTT TATCGGCTGC 
CTGGCCGAAG GCGAAACCAT CACTCTGCTG GGGGGGATTG CCGCGCACCA GGGGTTACTG
CATCTGCCCT GGGTGATTGC GGTGGTGGCA TTGGGGGGCA CATTAGGGGA TCAGATCCTG
TATTTCCTCG GTCGGCGCTT CGGCGGAAAG GTGATTTCAC GCATGAAGAG CCAGGAAAAG
CGCATTGAAC GCGCCAGGAA GCTGATTGCC CGCCACCCGA TGCTGTTCGT GATTGGCGTG
CGGTTTATGT ATGGTTTTCG CATCATTGGC CCGGTGTTAA TCGGTGCCAG CAAGCTGCCG
CCGTCGCGCT TTGTCCCATT GAATATTCTG GGCGCCATCC TGTGGGCAAC GATCTTTGTG
TTGCTGGGTT ATTTCGGCGG TGAAGCGATC GCCAGGTTTA TCTCGGGCTT CGACAAACGG
CTGACCAGCG TGCTGTTCTG CGCACTGGTG ATCGCCGTTA TCTTGCTGCT GCGATTTTGG
TGGCGCCGCC GCCATGCAGA CTAG
 
Protein sequence
MADLAHYITD YGYWALFIGC LAEGETITLL GGIAAHQGLL HLPWVIAVVA LGGTLGDQIL 
YFLGRRFGGK VISRMKSQEK RIERARKLIA RHPMLFVIGV RFMYGFRIIG PVLIGASKLP
PSRFVPLNIL GAILWATIFV LLGYFGGEAI ARFISGFDKR LTSVLFCALV IAVILLLRFW
WRRRHAD